Protein–RNA interactions for Protein: Q96BI3

APH1A, Gamma-secretase subunit APH-1A, humanhuman

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1AQ96BI3 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
APH1AQ96BI3 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
APH1AQ96BI3 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
APH1AQ96BI3 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
APH1AQ96BI3 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
APH1AQ96BI3 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC15.54■□□□□ 0.08
APH1AQ96BI3 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
APH1AQ96BI3 WAC-202ENST00000347934 2839 ntTSL 5 BASIC15.54■□□□□ 0.08
APH1AQ96BI3 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC15.54■□□□□ 0.08
APH1AQ96BI3 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC15.54■□□□□ 0.08
APH1AQ96BI3 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
APH1AQ96BI3 PMPCAP1-201ENST00000508114 1576 ntBASIC15.54■□□□□ 0.08
APH1AQ96BI3 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
APH1AQ96BI3 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
APH1AQ96BI3 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC15.54■□□□□ 0.08
APH1AQ96BI3 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
APH1AQ96BI3 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
APH1AQ96BI3 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
APH1AQ96BI3 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
APH1AQ96BI3 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC15.54■□□□□ 0.08
APH1AQ96BI3 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC15.54■□□□□ 0.08
APH1AQ96BI3 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
APH1AQ96BI3 AC003669.1-201ENST00000334569 611 ntBASIC15.54■□□□□ 0.08
APH1AQ96BI3 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
APH1AQ96BI3 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC15.54■□□□□ 0.08
APH1AQ96BI3 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC15.54■□□□□ 0.08
APH1AQ96BI3 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC15.54■□□□□ 0.08
APH1AQ96BI3 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC15.54■□□□□ 0.08
APH1AQ96BI3 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC15.54■□□□□ 0.08
APH1AQ96BI3 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
APH1AQ96BI3 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC15.54■□□□□ 0.08
APH1AQ96BI3 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC15.54■□□□□ 0.08
APH1AQ96BI3 AL121894.2-201ENST00000602977 491 ntBASIC15.54■□□□□ 0.08
APH1AQ96BI3 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC15.54■□□□□ 0.08
APH1AQ96BI3 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC15.54■□□□□ 0.08
APH1AQ96BI3 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
APH1AQ96BI3 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
APH1AQ96BI3 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
APH1AQ96BI3 REXO1L11P-201ENST00000620964 1927 ntBASIC15.54■□□□□ 0.08
APH1AQ96BI3 GNAS-203ENST00000306120 1878 ntBASIC15.54■□□□□ 0.08
APH1AQ96BI3 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
APH1AQ96BI3 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
APH1AQ96BI3 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
APH1AQ96BI3 OR6D1P-203ENST00000641209 4860 ntBASIC15.54■□□□□ 0.08
APH1AQ96BI3 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
APH1AQ96BI3 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC15.53■□□□□ 0.08
APH1AQ96BI3 FUT8-AS1-201ENST00000621019 1521 ntBASIC15.53■□□□□ 0.08
APH1AQ96BI3 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC15.53■□□□□ 0.08
APH1AQ96BI3 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC15.53■□□□□ 0.08
APH1AQ96BI3 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC15.53■□□□□ 0.08
APH1AQ96BI3 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC15.53■□□□□ 0.08
APH1AQ96BI3 PAN3-AS1-201ENST00000563843 1351 ntBASIC15.53■□□□□ 0.08
APH1AQ96BI3 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
APH1AQ96BI3 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC15.53■□□□□ 0.08
APH1AQ96BI3 HIST2H3DP1-201ENST00000401004 416 ntBASIC15.53■□□□□ 0.08
APH1AQ96BI3 KLF4P1-201ENST00000412782 1185 ntBASIC15.53■□□□□ 0.08
APH1AQ96BI3 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
APH1AQ96BI3 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
APH1AQ96BI3 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
APH1AQ96BI3 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC15.53■□□□□ 0.08
APH1AQ96BI3 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC15.53■□□□□ 0.08
APH1AQ96BI3 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC15.53■□□□□ 0.08
APH1AQ96BI3 AL139288.1-201ENST00000623748 933 ntBASIC15.53■□□□□ 0.08
APH1AQ96BI3 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC15.53■□□□□ 0.08
APH1AQ96BI3 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
APH1AQ96BI3 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
APH1AQ96BI3 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
APH1AQ96BI3 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
APH1AQ96BI3 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
APH1AQ96BI3 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
APH1AQ96BI3 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC15.53■□□□□ 0.08
APH1AQ96BI3 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
APH1AQ96BI3 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC15.53■□□□□ 0.08
APH1AQ96BI3 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
APH1AQ96BI3 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
APH1AQ96BI3 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
APH1AQ96BI3 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC15.52■□□□□ 0.08
APH1AQ96BI3 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC15.52■□□□□ 0.08
APH1AQ96BI3 HARS-201ENST00000307633 1780 ntTSL 2 BASIC15.52■□□□□ 0.08
APH1AQ96BI3 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
APH1AQ96BI3 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC15.52■□□□□ 0.08
APH1AQ96BI3 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
APH1AQ96BI3 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
APH1AQ96BI3 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC15.52■□□□□ 0.08
APH1AQ96BI3 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
APH1AQ96BI3 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
APH1AQ96BI3 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
APH1AQ96BI3 TLE1-202ENST00000376484 666 ntTSL 3 BASIC15.52■□□□□ 0.08
APH1AQ96BI3 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
APH1AQ96BI3 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
APH1AQ96BI3 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC15.52■□□□□ 0.08
APH1AQ96BI3 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC15.52■□□□□ 0.08
APH1AQ96BI3 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC15.52■□□□□ 0.08
APH1AQ96BI3 FGFR3P6-201ENST00000457012 610 ntBASIC15.52■□□□□ 0.08
APH1AQ96BI3 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC15.52■□□□□ 0.08
APH1AQ96BI3 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC15.52■□□□□ 0.08
APH1AQ96BI3 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC15.52■□□□□ 0.08
APH1AQ96BI3 AL031008.1-201ENST00000619963 541 ntBASIC15.52■□□□□ 0.08
APH1AQ96BI3 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
APH1AQ96BI3 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 64 ms