Protein–RNA interactions for Protein: Q96BH1

RNF25, E3 ubiquitin-protein ligase RNF25, humanhuman

Predicted RBP Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF25Q96BH1 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC18.48■□□□□ 0.55
RNF25Q96BH1 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
RNF25Q96BH1 MTCL1P1-201ENST00000446207 792 ntBASIC18.48■□□□□ 0.55
RNF25Q96BH1 AC068472.1-201ENST00000474589 881 ntBASIC18.48■□□□□ 0.55
RNF25Q96BH1 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC18.48■□□□□ 0.55
RNF25Q96BH1 HTR4-207ENST00000520514 1236 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RNF25Q96BH1 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC18.48■□□□□ 0.55
RNF25Q96BH1 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC18.48■□□□□ 0.55
RNF25Q96BH1 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC18.48■□□□□ 0.55
RNF25Q96BH1 RNF126P1-202ENST00000569893 925 ntBASIC18.48■□□□□ 0.55
RNF25Q96BH1 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RNF25Q96BH1 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RNF25Q96BH1 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC18.48■□□□□ 0.55
RNF25Q96BH1 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RNF25Q96BH1 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RNF25Q96BH1 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RNF25Q96BH1 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
RNF25Q96BH1 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
RNF25Q96BH1 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RNF25Q96BH1 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC18.47■□□□□ 0.55
RNF25Q96BH1 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC18.47■□□□□ 0.55
RNF25Q96BH1 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RNF25Q96BH1 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC18.47■□□□□ 0.55
RNF25Q96BH1 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
RNF25Q96BH1 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
RNF25Q96BH1 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RNF25Q96BH1 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RNF25Q96BH1 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC18.47■□□□□ 0.55
RNF25Q96BH1 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RNF25Q96BH1 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC18.47■□□□□ 0.55
RNF25Q96BH1 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
RNF25Q96BH1 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RNF25Q96BH1 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
RNF25Q96BH1 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RNF25Q96BH1 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RNF25Q96BH1 DDT-203ENST00000403754 569 ntTSL 3 BASIC18.47■□□□□ 0.55
RNF25Q96BH1 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RNF25Q96BH1 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC18.47■□□□□ 0.55
RNF25Q96BH1 DDT-206ENST00000430101 573 ntTSL 2 BASIC18.47■□□□□ 0.55
RNF25Q96BH1 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC18.47■□□□□ 0.55
RNF25Q96BH1 IL20RB-AS1-201ENST00000462176 562 ntTSL 4 BASIC18.47■□□□□ 0.55
RNF25Q96BH1 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RNF25Q96BH1 AC022558.1-201ENST00000560450 454 ntTSL 3 BASIC18.47■□□□□ 0.55
RNF25Q96BH1 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC18.47■□□□□ 0.55
RNF25Q96BH1 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
RNF25Q96BH1 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
RNF25Q96BH1 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
RNF25Q96BH1 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
RNF25Q96BH1 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
RNF25Q96BH1 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
RNF25Q96BH1 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RNF25Q96BH1 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
RNF25Q96BH1 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RNF25Q96BH1 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC18.47■□□□□ 0.55
RNF25Q96BH1 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
RNF25Q96BH1 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC18.47■□□□□ 0.55
RNF25Q96BH1 LRRIQ3-203ENST00000370911 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
RNF25Q96BH1 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RNF25Q96BH1 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNF25Q96BH1 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNF25Q96BH1 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNF25Q96BH1 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC18.46■□□□□ 0.55
RNF25Q96BH1 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
RNF25Q96BH1 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNF25Q96BH1 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNF25Q96BH1 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNF25Q96BH1 AL121761.2-201ENST00000598007 1648 ntBASIC18.46■□□□□ 0.55
RNF25Q96BH1 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNF25Q96BH1 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNF25Q96BH1 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNF25Q96BH1 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC18.46■□□□□ 0.55
RNF25Q96BH1 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RNF25Q96BH1 AC010422.1-201ENST00000414548 543 ntTSL 2 BASIC18.46■□□□□ 0.55
RNF25Q96BH1 SPDYE13P-201ENST00000445314 798 ntBASIC18.46■□□□□ 0.55
RNF25Q96BH1 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC18.46■□□□□ 0.55
RNF25Q96BH1 NAA38-203ENST00000575071 553 ntTSL 2 BASIC18.46■□□□□ 0.55
RNF25Q96BH1 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNF25Q96BH1 AL390719.2-201ENST00000606993 987 ntBASIC18.46■□□□□ 0.55
RNF25Q96BH1 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC18.46■□□□□ 0.55
RNF25Q96BH1 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RNF25Q96BH1 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNF25Q96BH1 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNF25Q96BH1 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
RNF25Q96BH1 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RNF25Q96BH1 TPR-209ENST00000613151 2478 ntTSL 5 BASIC18.46■□□□□ 0.55
RNF25Q96BH1 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNF25Q96BH1 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC18.46■□□□□ 0.55
RNF25Q96BH1 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC18.46■□□□□ 0.55
RNF25Q96BH1 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC18.46■□□□□ 0.55
RNF25Q96BH1 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC18.46■□□□□ 0.55
RNF25Q96BH1 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RNF25Q96BH1 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNF25Q96BH1 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.54
RNF25Q96BH1 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC18.46■□□□□ 0.54
RNF25Q96BH1 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC18.45■□□□□ 0.54
RNF25Q96BH1 Z83836.1-201ENST00000624605 1642 ntBASIC18.45■□□□□ 0.54
RNF25Q96BH1 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC18.45■□□□□ 0.54
RNF25Q96BH1 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
RNF25Q96BH1 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RNF25Q96BH1 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms