Protein–RNA interactions for Protein: Q96B33

CLDN23, Claudin-23, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN23Q96B33 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC17.36■□□□□ 0.37
CLDN23Q96B33 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC17.36■□□□□ 0.37
CLDN23Q96B33 BAD-207ENST00000544785 525 ntTSL 3 BASIC17.36■□□□□ 0.37
CLDN23Q96B33 DUX4L17-201ENST00000557360 1267 ntBASIC17.36■□□□□ 0.37
CLDN23Q96B33 LINC01225-203ENST00000563550 1244 ntBASIC17.36■□□□□ 0.37
CLDN23Q96B33 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC17.36■□□□□ 0.37
CLDN23Q96B33 RAB34-224ENST00000636513 888 ntTSL 5 BASIC17.36■□□□□ 0.37
CLDN23Q96B33 AC084121.4-201ENST00000641598 221 ntBASIC17.36■□□□□ 0.37
CLDN23Q96B33 AF228730.8-201ENST00000642140 221 ntBASIC17.36■□□□□ 0.37
CLDN23Q96B33 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLDN23Q96B33 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
CLDN23Q96B33 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLDN23Q96B33 FO538757.1-201ENST00000623083 1397 ntBASIC17.36■□□□□ 0.37
CLDN23Q96B33 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLDN23Q96B33 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
CLDN23Q96B33 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLDN23Q96B33 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLDN23Q96B33 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
CLDN23Q96B33 AL135999.2-201ENST00000622438 1686 ntBASIC17.36■□□□□ 0.37
CLDN23Q96B33 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
CLDN23Q96B33 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC17.35■□□□□ 0.37
CLDN23Q96B33 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC17.35■□□□□ 0.37
CLDN23Q96B33 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLDN23Q96B33 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC17.35■□□□□ 0.37
CLDN23Q96B33 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CLDN23Q96B33 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CLDN23Q96B33 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CLDN23Q96B33 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLDN23Q96B33 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLDN23Q96B33 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC17.35■□□□□ 0.37
CLDN23Q96B33 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CLDN23Q96B33 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC17.35■□□□□ 0.37
CLDN23Q96B33 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLDN23Q96B33 RAC2-204ENST00000406508 893 ntTSL 5 BASIC17.35■□□□□ 0.37
CLDN23Q96B33 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC17.35■□□□□ 0.37
CLDN23Q96B33 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC17.35■□□□□ 0.37
CLDN23Q96B33 SPCS2P4-201ENST00000436160 681 ntBASIC17.35■□□□□ 0.37
CLDN23Q96B33 SLC25A39P2-201ENST00000537614 270 ntBASIC17.35■□□□□ 0.37
CLDN23Q96B33 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
CLDN23Q96B33 KRT8P23-201ENST00000560090 1207 ntBASIC17.35■□□□□ 0.37
CLDN23Q96B33 COX11-202ENST00000571584 1108 ntTSL 2 BASIC17.35■□□□□ 0.37
CLDN23Q96B33 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLDN23Q96B33 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC17.35■□□□□ 0.37
CLDN23Q96B33 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CLDN23Q96B33 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC17.35■□□□□ 0.37
CLDN23Q96B33 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC17.35■□□□□ 0.37
CLDN23Q96B33 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC17.35■□□□□ 0.37
CLDN23Q96B33 AC093677.2-201ENST00000600169 1863 ntBASIC17.35■□□□□ 0.37
CLDN23Q96B33 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLDN23Q96B33 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLDN23Q96B33 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLDN23Q96B33 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLDN23Q96B33 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC17.35■□□□□ 0.37
CLDN23Q96B33 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC17.35■□□□□ 0.37
CLDN23Q96B33 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLDN23Q96B33 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLDN23Q96B33 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CLDN23Q96B33 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC17.34■□□□□ 0.37
CLDN23Q96B33 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CLDN23Q96B33 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC17.34■□□□□ 0.37
CLDN23Q96B33 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC17.34■□□□□ 0.37
CLDN23Q96B33 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC17.34■□□□□ 0.37
CLDN23Q96B33 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CLDN23Q96B33 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
CLDN23Q96B33 AC107918.2-201ENST00000530817 355 ntBASIC17.34■□□□□ 0.37
CLDN23Q96B33 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC17.34■□□□□ 0.37
CLDN23Q96B33 COQ6-210ENST00000554920 649 ntTSL 3 BASIC17.34■□□□□ 0.37
CLDN23Q96B33 MIR4515-201ENST00000584082 81 ntBASIC17.34■□□□□ 0.37
CLDN23Q96B33 AL158211.3-201ENST00000607385 239 ntBASIC17.34■□□□□ 0.37
CLDN23Q96B33 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLDN23Q96B33 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC17.34■□□□□ 0.37
CLDN23Q96B33 AL161645.1-201ENST00000622716 1255 ntBASIC17.34■□□□□ 0.37
CLDN23Q96B33 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CLDN23Q96B33 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLDN23Q96B33 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC17.34■□□□□ 0.37
CLDN23Q96B33 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLDN23Q96B33 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLDN23Q96B33 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CLDN23Q96B33 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CLDN23Q96B33 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC17.33■□□□□ 0.37
CLDN23Q96B33 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CLDN23Q96B33 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CLDN23Q96B33 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC17.33■□□□□ 0.37
CLDN23Q96B33 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC17.33■□□□□ 0.37
CLDN23Q96B33 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC17.33■□□□□ 0.37
CLDN23Q96B33 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.37
CLDN23Q96B33 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
CLDN23Q96B33 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC17.33■□□□□ 0.36
CLDN23Q96B33 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CLDN23Q96B33 SPDYE7P-202ENST00000420373 878 ntBASIC17.33■□□□□ 0.36
CLDN23Q96B33 TREML5P-201ENST00000421694 576 ntBASIC17.33■□□□□ 0.36
CLDN23Q96B33 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC17.33■□□□□ 0.36
CLDN23Q96B33 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CLDN23Q96B33 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CLDN23Q96B33 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC17.33■□□□□ 0.36
CLDN23Q96B33 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CLDN23Q96B33 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CLDN23Q96B33 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC17.33■□□□□ 0.36
CLDN23Q96B33 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC17.33■□□□□ 0.36
CLDN23Q96B33 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms