Protein–RNA interactions for Protein: Q93008

USP9X, Probable ubiquitin carboxyl-terminal hydrolase FAF-X, humanhuman

Predicted RBP Predictions only

Length 2,570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP9XQ93008 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
USP9XQ93008 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
USP9XQ93008 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
USP9XQ93008 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
USP9XQ93008 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
USP9XQ93008 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
USP9XQ93008 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
USP9XQ93008 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
USP9XQ93008 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
USP9XQ93008 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
USP9XQ93008 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC15.11■□□□□ 0.01
USP9XQ93008 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
USP9XQ93008 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC15.11■□□□□ 0.01
USP9XQ93008 AC119751.2-201ENST00000504529 210 ntBASIC15.11■□□□□ 0.01
USP9XQ93008 POLE2-203ENST00000553805 496 ntTSL 2 BASIC15.11■□□□□ 0.01
USP9XQ93008 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
USP9XQ93008 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC15.11■□□□□ 0.01
USP9XQ93008 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
USP9XQ93008 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
USP9XQ93008 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC15.1■□□□□ 0.01
USP9XQ93008 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
USP9XQ93008 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
USP9XQ93008 AC009949.1-201ENST00000623048 1830 ntBASIC15.1■□□□□ 0.01
USP9XQ93008 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
USP9XQ93008 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
USP9XQ93008 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
USP9XQ93008 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
USP9XQ93008 MIR658-201ENST00000385210 100 ntBASIC15.1■□□□□ 0.01
USP9XQ93008 LINC00982-205ENST00000420957 435 ntBASIC15.1■□□□□ 0.01
USP9XQ93008 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC15.1■□□□□ 0.01
USP9XQ93008 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC15.1■□□□□ 0.01
USP9XQ93008 AC107918.2-201ENST00000530817 355 ntBASIC15.1■□□□□ 0.01
USP9XQ93008 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC15.1■□□□□ 0.01
USP9XQ93008 ARL16-202ENST00000570561 768 ntTSL 2 BASIC15.1■□□□□ 0.01
USP9XQ93008 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
USP9XQ93008 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
USP9XQ93008 PHGDH-209ENST00000641074 1780 ntBASIC15.1■□□□□ 0.01
USP9XQ93008 AC093010.1-201ENST00000473625 1624 ntBASIC15.1■□□□□ 0.01
USP9XQ93008 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC15.1■□□□□ 0.01
USP9XQ93008 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
USP9XQ93008 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC15.1■□□□□ 0.01
USP9XQ93008 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
USP9XQ93008 WASH6P-202ENST00000359512 1437 ntBASIC15.1■□□□□ 0.01
USP9XQ93008 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
USP9XQ93008 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
USP9XQ93008 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
USP9XQ93008 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
USP9XQ93008 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
USP9XQ93008 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC15.1■□□□□ 0.01
USP9XQ93008 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC15.1■□□□□ 0.01
USP9XQ93008 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC15.1■□□□□ 0.01
USP9XQ93008 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC15.1■□□□□ 0.01
USP9XQ93008 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC15.1■□□□□ 0.01
USP9XQ93008 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC15.1■□□□□ 0.01
USP9XQ93008 AC003101.2-201ENST00000612557 442 ntBASIC15.1■□□□□ 0.01
USP9XQ93008 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
USP9XQ93008 GPR182-203ENST00000622922 591 ntBASIC15.1■□□□□ 0.01
USP9XQ93008 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
USP9XQ93008 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC15.1■□□□□ 0.01
USP9XQ93008 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
USP9XQ93008 BID-204ENST00000399767 2129 ntTSL 2 BASIC15.1■□□□□ 0.01
USP9XQ93008 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
USP9XQ93008 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
USP9XQ93008 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
USP9XQ93008 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
USP9XQ93008 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
USP9XQ93008 AC092933.1-201ENST00000393644 945 ntBASIC15.09■□□□□ 0.01
USP9XQ93008 SPCS2P4-201ENST00000436160 681 ntBASIC15.09■□□□□ 0.01
USP9XQ93008 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC15.09■□□□□ 0.01
USP9XQ93008 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
USP9XQ93008 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC15.09■□□□□ 0.01
USP9XQ93008 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
USP9XQ93008 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
USP9XQ93008 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC15.09■□□□□ 0.01
USP9XQ93008 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
USP9XQ93008 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
USP9XQ93008 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
USP9XQ93008 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
USP9XQ93008 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC15.09■□□□□ 0.01
USP9XQ93008 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC15.09■□□□□ 0.01
USP9XQ93008 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC15.09■□□□□ 0.01
USP9XQ93008 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
USP9XQ93008 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
USP9XQ93008 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
USP9XQ93008 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC15.09■□□□□ 0.01
USP9XQ93008 SPDYE7P-202ENST00000420373 878 ntBASIC15.09■□□□□ 0.01
USP9XQ93008 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
USP9XQ93008 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
USP9XQ93008 IGHV3-42-201ENST00000520410 361 ntBASIC15.09■□□□□ 0.01
USP9XQ93008 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC15.09■□□□□ 0.01
USP9XQ93008 NAT9-224ENST00000583757 583 ntTSL 3 BASIC15.09■□□□□ 0.01
USP9XQ93008 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
USP9XQ93008 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC15.08■□□□□ 0.01
USP9XQ93008 AL590787.1-201ENST00000568856 1315 ntBASIC15.08■□□□□ 0.01
USP9XQ93008 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
USP9XQ93008 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
USP9XQ93008 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC15.08■□□□□ 0
USP9XQ93008 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
USP9XQ93008 AC009477.1-201ENST00000452936 217 ntBASIC15.08■□□□□ 0
USP9XQ93008 AC087163.2-201ENST00000457299 853 ntBASIC15.08■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms