Protein–RNA interactions for Protein: Q92854

SEMA4D, Semaphorin-4D, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4DQ92854 AC080080.1-201ENST00000625121 2420 ntBASIC18.83■□□□□ 0.6
SEMA4DQ92854 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SEMA4DQ92854 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
SEMA4DQ92854 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SEMA4DQ92854 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SEMA4DQ92854 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC18.83■□□□□ 0.6
SEMA4DQ92854 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
SEMA4DQ92854 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
SEMA4DQ92854 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC18.82■□□□□ 0.6
SEMA4DQ92854 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SEMA4DQ92854 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SEMA4DQ92854 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
SEMA4DQ92854 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
SEMA4DQ92854 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SEMA4DQ92854 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
SEMA4DQ92854 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SEMA4DQ92854 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SEMA4DQ92854 LSM5-204ENST00000409909 740 ntTSL 2 BASIC18.82■□□□□ 0.6
SEMA4DQ92854 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SEMA4DQ92854 NKTR-203ENST00000442970 646 ntTSL 2 BASIC18.82■□□□□ 0.6
SEMA4DQ92854 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC18.82■□□□□ 0.6
SEMA4DQ92854 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
SEMA4DQ92854 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC18.82■□□□□ 0.6
SEMA4DQ92854 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC18.82■□□□□ 0.6
SEMA4DQ92854 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SEMA4DQ92854 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SEMA4DQ92854 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SEMA4DQ92854 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SEMA4DQ92854 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SEMA4DQ92854 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC18.82■□□□□ 0.6
SEMA4DQ92854 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
SEMA4DQ92854 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SEMA4DQ92854 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC18.82■□□□□ 0.6
SEMA4DQ92854 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SEMA4DQ92854 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
SEMA4DQ92854 AC148477.5-201ENST00000625164 1645 ntBASIC18.82■□□□□ 0.6
SEMA4DQ92854 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SEMA4DQ92854 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC18.81■□□□□ 0.6
SEMA4DQ92854 AC009336.1-201ENST00000608941 1553 ntBASIC18.81■□□□□ 0.6
SEMA4DQ92854 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SEMA4DQ92854 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SEMA4DQ92854 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SEMA4DQ92854 EMD-201ENST00000369835 966 ntTSL 3 BASIC18.81■□□□□ 0.6
SEMA4DQ92854 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
SEMA4DQ92854 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC18.81■□□□□ 0.6
SEMA4DQ92854 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC18.81■□□□□ 0.6
SEMA4DQ92854 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC18.81■□□□□ 0.6
SEMA4DQ92854 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC18.81■□□□□ 0.6
SEMA4DQ92854 PRELID1P1-202ENST00000567272 903 ntBASIC18.81■□□□□ 0.6
SEMA4DQ92854 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SEMA4DQ92854 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SEMA4DQ92854 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC18.81■□□□□ 0.6
SEMA4DQ92854 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SEMA4DQ92854 AC016396.2-201ENST00000562575 1417 ntBASIC18.81■□□□□ 0.6
SEMA4DQ92854 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
SEMA4DQ92854 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SEMA4DQ92854 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SEMA4DQ92854 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SEMA4DQ92854 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SEMA4DQ92854 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SEMA4DQ92854 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
SEMA4DQ92854 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
SEMA4DQ92854 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SEMA4DQ92854 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SEMA4DQ92854 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
SEMA4DQ92854 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SEMA4DQ92854 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
SEMA4DQ92854 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SEMA4DQ92854 SOD2-201ENST00000337404 991 ntTSL 2 BASIC18.8■□□□□ 0.6
SEMA4DQ92854 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC18.8■□□□□ 0.6
SEMA4DQ92854 STK19B-204ENST00000512515 211 ntBASIC18.8■□□□□ 0.6
SEMA4DQ92854 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC18.8■□□□□ 0.6
SEMA4DQ92854 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC18.8■□□□□ 0.6
SEMA4DQ92854 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
SEMA4DQ92854 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SEMA4DQ92854 AP001094.4-201ENST00000579008 2176 ntBASIC18.8■□□□□ 0.6
SEMA4DQ92854 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SEMA4DQ92854 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
SEMA4DQ92854 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SEMA4DQ92854 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SEMA4DQ92854 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC18.8■□□□□ 0.6
SEMA4DQ92854 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC18.8■□□□□ 0.6
SEMA4DQ92854 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SEMA4DQ92854 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SEMA4DQ92854 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SEMA4DQ92854 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
SEMA4DQ92854 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SEMA4DQ92854 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC18.79■□□□□ 0.6
SEMA4DQ92854 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SEMA4DQ92854 AC116353.5-201ENST00000638148 1699 ntBASIC18.79■□□□□ 0.6
SEMA4DQ92854 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
SEMA4DQ92854 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC18.79■□□□□ 0.6
SEMA4DQ92854 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
SEMA4DQ92854 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SEMA4DQ92854 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC18.79■□□□□ 0.6
SEMA4DQ92854 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
SEMA4DQ92854 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SEMA4DQ92854 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SEMA4DQ92854 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC18.79■□□□□ 0.6
SEMA4DQ92854 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 91 ms