Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
SLC44A1Q8WWI5 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
SLC44A1Q8WWI5 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC17.57■□□□□ 0.4
SLC44A1Q8WWI5 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
SLC44A1Q8WWI5 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SLC44A1Q8WWI5 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
SLC44A1Q8WWI5 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
SLC44A1Q8WWI5 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SLC44A1Q8WWI5 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SLC44A1Q8WWI5 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC17.57■□□□□ 0.4
SLC44A1Q8WWI5 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SLC44A1Q8WWI5 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SLC44A1Q8WWI5 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC17.57■□□□□ 0.4
SLC44A1Q8WWI5 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC17.57■□□□□ 0.4
SLC44A1Q8WWI5 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
SLC44A1Q8WWI5 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC17.57■□□□□ 0.4
SLC44A1Q8WWI5 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SLC44A1Q8WWI5 CNP-204ENST00000472031 1019 ntTSL 2 BASIC17.57■□□□□ 0.4
SLC44A1Q8WWI5 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SLC44A1Q8WWI5 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC17.57■□□□□ 0.4
SLC44A1Q8WWI5 AC073912.3-201ENST00000624414 853 ntBASIC17.57■□□□□ 0.4
SLC44A1Q8WWI5 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC17.57■□□□□ 0.4
SLC44A1Q8WWI5 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
SLC44A1Q8WWI5 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SLC44A1Q8WWI5 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
SLC44A1Q8WWI5 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SLC44A1Q8WWI5 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
SLC44A1Q8WWI5 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SLC44A1Q8WWI5 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
SLC44A1Q8WWI5 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SLC44A1Q8WWI5 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
SLC44A1Q8WWI5 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SLC44A1Q8WWI5 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLC44A1Q8WWI5 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SLC44A1Q8WWI5 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLC44A1Q8WWI5 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLC44A1Q8WWI5 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC17.56■□□□□ 0.4
SLC44A1Q8WWI5 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
SLC44A1Q8WWI5 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLC44A1Q8WWI5 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLC44A1Q8WWI5 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLC44A1Q8WWI5 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SLC44A1Q8WWI5 AC097374.2-201ENST00000618617 1306 ntBASIC17.56■□□□□ 0.4
SLC44A1Q8WWI5 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLC44A1Q8WWI5 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLC44A1Q8WWI5 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLC44A1Q8WWI5 COX5BP2-201ENST00000392354 334 ntBASIC17.56■□□□□ 0.4
SLC44A1Q8WWI5 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SLC44A1Q8WWI5 STARP1-201ENST00000397973 869 ntBASIC17.56■□□□□ 0.4
SLC44A1Q8WWI5 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC17.56■□□□□ 0.4
SLC44A1Q8WWI5 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLC44A1Q8WWI5 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLC44A1Q8WWI5 NAA38-203ENST00000575071 553 ntTSL 2 BASIC17.56■□□□□ 0.4
SLC44A1Q8WWI5 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC17.56■□□□□ 0.4
SLC44A1Q8WWI5 AL031432.5-201ENST00000641059 760 ntBASIC17.56■□□□□ 0.4
SLC44A1Q8WWI5 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLC44A1Q8WWI5 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SLC44A1Q8WWI5 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLC44A1Q8WWI5 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC17.56■□□□□ 0.4
SLC44A1Q8WWI5 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SLC44A1Q8WWI5 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLC44A1Q8WWI5 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SLC44A1Q8WWI5 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
SLC44A1Q8WWI5 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLC44A1Q8WWI5 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLC44A1Q8WWI5 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLC44A1Q8WWI5 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SLC44A1Q8WWI5 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SLC44A1Q8WWI5 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SLC44A1Q8WWI5 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SLC44A1Q8WWI5 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SLC44A1Q8WWI5 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SLC44A1Q8WWI5 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SLC44A1Q8WWI5 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC17.55■□□□□ 0.4
SLC44A1Q8WWI5 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SLC44A1Q8WWI5 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SLC44A1Q8WWI5 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
SLC44A1Q8WWI5 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SLC44A1Q8WWI5 AC010460.3-201ENST00000511359 1579 ntBASIC17.55■□□□□ 0.4
SLC44A1Q8WWI5 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SLC44A1Q8WWI5 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SLC44A1Q8WWI5 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC17.55■□□□□ 0.4
SLC44A1Q8WWI5 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SLC44A1Q8WWI5 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
SLC44A1Q8WWI5 FAM8A6P-201ENST00000407496 1135 ntBASIC17.55■□□□□ 0.4
SLC44A1Q8WWI5 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC17.55■□□□□ 0.4
SLC44A1Q8WWI5 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC17.55■□□□□ 0.4
SLC44A1Q8WWI5 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC17.55■□□□□ 0.4
SLC44A1Q8WWI5 AP003733.1-201ENST00000491725 852 ntBASIC17.55■□□□□ 0.4
SLC44A1Q8WWI5 DUT-205ENST00000558813 769 ntTSL 2 BASIC17.55■□□□□ 0.4
SLC44A1Q8WWI5 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC17.55■□□□□ 0.4
SLC44A1Q8WWI5 AC145285.6-201ENST00000604632 637 ntBASIC17.55■□□□□ 0.4
SLC44A1Q8WWI5 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
SLC44A1Q8WWI5 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SLC44A1Q8WWI5 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC17.55■□□□□ 0.4
SLC44A1Q8WWI5 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SLC44A1Q8WWI5 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC17.55■□□□□ 0.4
SLC44A1Q8WWI5 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
SLC44A1Q8WWI5 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC17.55■□□□□ 0.4
SLC44A1Q8WWI5 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms