Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC11.66□□□□□ -0.54
ALMS1Q8TCU4 AC112492.5-201ENST00000421897 457 ntBASIC11.66□□□□□ -0.54
ALMS1Q8TCU4 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC11.66□□□□□ -0.54
ALMS1Q8TCU4 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC11.66□□□□□ -0.54
ALMS1Q8TCU4 AC004233.3-201ENST00000607794 1269 ntBASIC11.66□□□□□ -0.54
ALMS1Q8TCU4 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
ALMS1Q8TCU4 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
ALMS1Q8TCU4 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC11.66□□□□□ -0.54
ALMS1Q8TCU4 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC11.66□□□□□ -0.54
ALMS1Q8TCU4 AC126763.1-201ENST00000552015 2118 ntBASIC11.66□□□□□ -0.54
ALMS1Q8TCU4 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
ALMS1Q8TCU4 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC11.66□□□□□ -0.54
ALMS1Q8TCU4 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
ALMS1Q8TCU4 MIR658-201ENST00000385210 100 ntBASIC11.66□□□□□ -0.54
ALMS1Q8TCU4 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC11.66□□□□□ -0.54
ALMS1Q8TCU4 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC11.66□□□□□ -0.54
ALMS1Q8TCU4 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC11.66□□□□□ -0.54
ALMS1Q8TCU4 AC119751.2-201ENST00000504529 210 ntBASIC11.66□□□□□ -0.54
ALMS1Q8TCU4 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
ALMS1Q8TCU4 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
ALMS1Q8TCU4 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
ALMS1Q8TCU4 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
ALMS1Q8TCU4 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC11.65□□□□□ -0.54
ALMS1Q8TCU4 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
ALMS1Q8TCU4 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC11.65□□□□□ -0.54
ALMS1Q8TCU4 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC11.65□□□□□ -0.54
ALMS1Q8TCU4 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
ALMS1Q8TCU4 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.54
ALMS1Q8TCU4 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
ALMS1Q8TCU4 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC11.65□□□□□ -0.54
ALMS1Q8TCU4 KRT17P8-201ENST00000540749 863 ntBASIC11.65□□□□□ -0.54
ALMS1Q8TCU4 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
ALMS1Q8TCU4 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC11.65□□□□□ -0.54
ALMS1Q8TCU4 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC11.65□□□□□ -0.54
ALMS1Q8TCU4 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC11.65□□□□□ -0.54
ALMS1Q8TCU4 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
ALMS1Q8TCU4 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
ALMS1Q8TCU4 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
ALMS1Q8TCU4 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC11.65□□□□□ -0.54
ALMS1Q8TCU4 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC11.65□□□□□ -0.54
ALMS1Q8TCU4 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
ALMS1Q8TCU4 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
ALMS1Q8TCU4 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
ALMS1Q8TCU4 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC11.65□□□□□ -0.54
ALMS1Q8TCU4 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
ALMS1Q8TCU4 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC11.65□□□□□ -0.54
ALMS1Q8TCU4 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC11.65□□□□□ -0.54
ALMS1Q8TCU4 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC11.65□□□□□ -0.54
ALMS1Q8TCU4 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC11.65□□□□□ -0.54
ALMS1Q8TCU4 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC11.65□□□□□ -0.54
ALMS1Q8TCU4 AL031055.1-201ENST00000606362 631 ntBASIC11.65□□□□□ -0.54
ALMS1Q8TCU4 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
ALMS1Q8TCU4 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC11.65□□□□□ -0.54
ALMS1Q8TCU4 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
ALMS1Q8TCU4 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
ALMS1Q8TCU4 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC11.65□□□□□ -0.54
ALMS1Q8TCU4 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
ALMS1Q8TCU4 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC11.65□□□□□ -0.54
ALMS1Q8TCU4 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
ALMS1Q8TCU4 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
ALMS1Q8TCU4 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC11.65□□□□□ -0.54
ALMS1Q8TCU4 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
ALMS1Q8TCU4 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
ALMS1Q8TCU4 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
ALMS1Q8TCU4 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.55
ALMS1Q8TCU4 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC11.65□□□□□ -0.55
ALMS1Q8TCU4 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
ALMS1Q8TCU4 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
ALMS1Q8TCU4 TMEM14DP-201ENST00000422205 345 ntBASIC11.64□□□□□ -0.55
ALMS1Q8TCU4 KRT17P7-201ENST00000451704 1104 ntBASIC11.64□□□□□ -0.55
ALMS1Q8TCU4 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
ALMS1Q8TCU4 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC11.64□□□□□ -0.55
ALMS1Q8TCU4 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC11.64□□□□□ -0.55
ALMS1Q8TCU4 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC11.64□□□□□ -0.55
ALMS1Q8TCU4 CDK4-206ENST00000549606 558 ntTSL 2 BASIC11.64□□□□□ -0.55
ALMS1Q8TCU4 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC11.64□□□□□ -0.55
ALMS1Q8TCU4 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
ALMS1Q8TCU4 AC008494.3-201ENST00000606615 944 ntBASIC11.64□□□□□ -0.55
ALMS1Q8TCU4 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
ALMS1Q8TCU4 AC016027.1-202ENST00000607927 1699 ntBASIC11.64□□□□□ -0.55
ALMS1Q8TCU4 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC11.64□□□□□ -0.55
ALMS1Q8TCU4 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
ALMS1Q8TCU4 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
ALMS1Q8TCU4 AP3S2-216ENST00000617003 1561 ntBASIC11.64□□□□□ -0.55
ALMS1Q8TCU4 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
ALMS1Q8TCU4 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
ALMS1Q8TCU4 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC11.64□□□□□ -0.55
ALMS1Q8TCU4 AL645728.2-201ENST00000641974 660 ntBASIC11.64□□□□□ -0.55
ALMS1Q8TCU4 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
ALMS1Q8TCU4 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC11.64□□□□□ -0.55
ALMS1Q8TCU4 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC11.64□□□□□ -0.55
ALMS1Q8TCU4 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
ALMS1Q8TCU4 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
ALMS1Q8TCU4 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
ALMS1Q8TCU4 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
ALMS1Q8TCU4 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
ALMS1Q8TCU4 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC11.64□□□□□ -0.55
ALMS1Q8TCU4 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC11.64□□□□□ -0.55
ALMS1Q8TCU4 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
ALMS1Q8TCU4 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms