Protein–RNA interactions for Protein: Q8NCS4

TMEM35B, Transmembrane protein 35B, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM35BQ8NCS4 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TMEM35BQ8NCS4 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TMEM35BQ8NCS4 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TMEM35BQ8NCS4 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TMEM35BQ8NCS4 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
TMEM35BQ8NCS4 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TMEM35BQ8NCS4 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TMEM35BQ8NCS4 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TMEM35BQ8NCS4 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC18.57■□□□□ 0.56
TMEM35BQ8NCS4 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TMEM35BQ8NCS4 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC18.57■□□□□ 0.56
TMEM35BQ8NCS4 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
TMEM35BQ8NCS4 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
TMEM35BQ8NCS4 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TMEM35BQ8NCS4 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
TMEM35BQ8NCS4 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TMEM35BQ8NCS4 TK1-204ENST00000590430 683 ntTSL 3 BASIC18.57■□□□□ 0.56
TMEM35BQ8NCS4 AC114341.1-201ENST00000618070 349 ntBASIC18.57■□□□□ 0.56
TMEM35BQ8NCS4 BANP-227ENST00000626016 2144 ntTSL 2 BASIC18.57■□□□□ 0.56
TMEM35BQ8NCS4 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TMEM35BQ8NCS4 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC18.57■□□□□ 0.56
TMEM35BQ8NCS4 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TMEM35BQ8NCS4 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC18.57■□□□□ 0.56
TMEM35BQ8NCS4 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TMEM35BQ8NCS4 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TMEM35BQ8NCS4 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC18.57■□□□□ 0.56
TMEM35BQ8NCS4 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TMEM35BQ8NCS4 AL353593.2-201ENST00000602529 1483 ntBASIC18.57■□□□□ 0.56
TMEM35BQ8NCS4 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TMEM35BQ8NCS4 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TMEM35BQ8NCS4 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TMEM35BQ8NCS4 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
TMEM35BQ8NCS4 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
TMEM35BQ8NCS4 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC18.57■□□□□ 0.56
TMEM35BQ8NCS4 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC18.56■□□□□ 0.56
TMEM35BQ8NCS4 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TMEM35BQ8NCS4 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TMEM35BQ8NCS4 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC18.56■□□□□ 0.56
TMEM35BQ8NCS4 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TMEM35BQ8NCS4 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
TMEM35BQ8NCS4 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TMEM35BQ8NCS4 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TMEM35BQ8NCS4 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TMEM35BQ8NCS4 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
TMEM35BQ8NCS4 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TMEM35BQ8NCS4 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC18.56■□□□□ 0.56
TMEM35BQ8NCS4 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TMEM35BQ8NCS4 RCN1P2-201ENST00000398357 915 ntBASIC18.56■□□□□ 0.56
TMEM35BQ8NCS4 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TMEM35BQ8NCS4 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TMEM35BQ8NCS4 BET1L-206ENST00000486280 665 ntTSL 3 BASIC18.56■□□□□ 0.56
TMEM35BQ8NCS4 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC18.56■□□□□ 0.56
TMEM35BQ8NCS4 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TMEM35BQ8NCS4 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC18.56■□□□□ 0.56
TMEM35BQ8NCS4 AC099336.1-202ENST00000602961 463 ntBASIC18.56■□□□□ 0.56
TMEM35BQ8NCS4 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
TMEM35BQ8NCS4 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
TMEM35BQ8NCS4 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
TMEM35BQ8NCS4 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
TMEM35BQ8NCS4 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
TMEM35BQ8NCS4 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC18.56■□□□□ 0.56
TMEM35BQ8NCS4 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TMEM35BQ8NCS4 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TMEM35BQ8NCS4 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TMEM35BQ8NCS4 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC18.55■□□□□ 0.56
TMEM35BQ8NCS4 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TMEM35BQ8NCS4 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TMEM35BQ8NCS4 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TMEM35BQ8NCS4 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC18.55■□□□□ 0.56
TMEM35BQ8NCS4 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TMEM35BQ8NCS4 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC18.55■□□□□ 0.56
TMEM35BQ8NCS4 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
TMEM35BQ8NCS4 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TMEM35BQ8NCS4 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC18.55■□□□□ 0.56
TMEM35BQ8NCS4 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC18.55■□□□□ 0.56
TMEM35BQ8NCS4 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC18.55■□□□□ 0.56
TMEM35BQ8NCS4 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TMEM35BQ8NCS4 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC18.55■□□□□ 0.56
TMEM35BQ8NCS4 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC18.55■□□□□ 0.56
TMEM35BQ8NCS4 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
TMEM35BQ8NCS4 COX5A-204ENST00000567270 579 ntTSL 3 BASIC18.55■□□□□ 0.56
TMEM35BQ8NCS4 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
TMEM35BQ8NCS4 STK25P1-201ENST00000585406 838 ntBASIC18.55■□□□□ 0.56
TMEM35BQ8NCS4 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC18.55■□□□□ 0.56
TMEM35BQ8NCS4 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC18.55■□□□□ 0.56
TMEM35BQ8NCS4 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
TMEM35BQ8NCS4 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
TMEM35BQ8NCS4 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TMEM35BQ8NCS4 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
TMEM35BQ8NCS4 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TMEM35BQ8NCS4 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC18.55■□□□□ 0.56
TMEM35BQ8NCS4 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC18.55■□□□□ 0.56
TMEM35BQ8NCS4 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TMEM35BQ8NCS4 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TMEM35BQ8NCS4 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
TMEM35BQ8NCS4 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC18.55■□□□□ 0.56
TMEM35BQ8NCS4 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC18.54■□□□□ 0.56
TMEM35BQ8NCS4 FUT8-AS1-201ENST00000621019 1521 ntBASIC18.54■□□□□ 0.56
TMEM35BQ8NCS4 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TMEM35BQ8NCS4 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms