Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
LSMEM1Q8N8F7 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC16.08■□□□□ 0.16
LSMEM1Q8N8F7 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
LSMEM1Q8N8F7 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LSMEM1Q8N8F7 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LSMEM1Q8N8F7 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LSMEM1Q8N8F7 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
LSMEM1Q8N8F7 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
LSMEM1Q8N8F7 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
LSMEM1Q8N8F7 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC16.07■□□□□ 0.16
LSMEM1Q8N8F7 AC007967.3-201ENST00000434308 558 ntBASIC16.07■□□□□ 0.16
LSMEM1Q8N8F7 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
LSMEM1Q8N8F7 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC16.07■□□□□ 0.16
LSMEM1Q8N8F7 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
LSMEM1Q8N8F7 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC16.07■□□□□ 0.16
LSMEM1Q8N8F7 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
LSMEM1Q8N8F7 NDUFV2-AS1-203ENST00000608008 779 ntBASIC16.07■□□□□ 0.16
LSMEM1Q8N8F7 AC124864.1-201ENST00000623408 392 ntBASIC16.07■□□□□ 0.16
LSMEM1Q8N8F7 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
LSMEM1Q8N8F7 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC16.07■□□□□ 0.16
LSMEM1Q8N8F7 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
LSMEM1Q8N8F7 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
LSMEM1Q8N8F7 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC16.07■□□□□ 0.16
LSMEM1Q8N8F7 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LSMEM1Q8N8F7 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
LSMEM1Q8N8F7 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC16.07■□□□□ 0.16
LSMEM1Q8N8F7 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LSMEM1Q8N8F7 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC16.07■□□□□ 0.16
LSMEM1Q8N8F7 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
LSMEM1Q8N8F7 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC16.07■□□□□ 0.16
LSMEM1Q8N8F7 FLJ38576-201ENST00000623820 2459 ntBASIC16.07■□□□□ 0.16
LSMEM1Q8N8F7 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
LSMEM1Q8N8F7 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LSMEM1Q8N8F7 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
LSMEM1Q8N8F7 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
LSMEM1Q8N8F7 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LSMEM1Q8N8F7 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LSMEM1Q8N8F7 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LSMEM1Q8N8F7 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
LSMEM1Q8N8F7 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
LSMEM1Q8N8F7 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LSMEM1Q8N8F7 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
LSMEM1Q8N8F7 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LSMEM1Q8N8F7 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LSMEM1Q8N8F7 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LSMEM1Q8N8F7 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LSMEM1Q8N8F7 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC16.06■□□□□ 0.16
LSMEM1Q8N8F7 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LSMEM1Q8N8F7 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LSMEM1Q8N8F7 C8orf49-201ENST00000525043 1968 ntBASIC16.06■□□□□ 0.16
LSMEM1Q8N8F7 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LSMEM1Q8N8F7 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LSMEM1Q8N8F7 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
LSMEM1Q8N8F7 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC16.06■□□□□ 0.16
LSMEM1Q8N8F7 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LSMEM1Q8N8F7 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC16.06■□□□□ 0.16
LSMEM1Q8N8F7 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC16.06■□□□□ 0.16
LSMEM1Q8N8F7 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC16.06■□□□□ 0.16
LSMEM1Q8N8F7 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LSMEM1Q8N8F7 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC16.06■□□□□ 0.16
LSMEM1Q8N8F7 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
LSMEM1Q8N8F7 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LSMEM1Q8N8F7 AL845331.1-201ENST00000424978 1190 ntBASIC16.06■□□□□ 0.16
LSMEM1Q8N8F7 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC16.06■□□□□ 0.16
LSMEM1Q8N8F7 AC246785.2-201ENST00000432512 513 ntBASIC16.06■□□□□ 0.16
LSMEM1Q8N8F7 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC16.06■□□□□ 0.16
LSMEM1Q8N8F7 NME3-204ENST00000563498 920 ntTSL 2 BASIC16.06■□□□□ 0.16
LSMEM1Q8N8F7 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC16.06■□□□□ 0.16
LSMEM1Q8N8F7 AL138831.2-201ENST00000606564 490 ntBASIC16.06■□□□□ 0.16
LSMEM1Q8N8F7 IGHV3-41-201ENST00000613121 348 ntBASIC16.06■□□□□ 0.16
LSMEM1Q8N8F7 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LSMEM1Q8N8F7 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LSMEM1Q8N8F7 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LSMEM1Q8N8F7 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
LSMEM1Q8N8F7 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC16.06■□□□□ 0.16
LSMEM1Q8N8F7 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC16.06■□□□□ 0.16
LSMEM1Q8N8F7 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LSMEM1Q8N8F7 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
LSMEM1Q8N8F7 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
LSMEM1Q8N8F7 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
LSMEM1Q8N8F7 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LSMEM1Q8N8F7 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LSMEM1Q8N8F7 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC16.06■□□□□ 0.16
LSMEM1Q8N8F7 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
LSMEM1Q8N8F7 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LSMEM1Q8N8F7 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC16.05■□□□□ 0.16
LSMEM1Q8N8F7 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LSMEM1Q8N8F7 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LSMEM1Q8N8F7 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LSMEM1Q8N8F7 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LSMEM1Q8N8F7 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC16.05■□□□□ 0.16
LSMEM1Q8N8F7 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
LSMEM1Q8N8F7 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC16.05■□□□□ 0.16
LSMEM1Q8N8F7 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LSMEM1Q8N8F7 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LSMEM1Q8N8F7 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LSMEM1Q8N8F7 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC16.05■□□□□ 0.16
LSMEM1Q8N8F7 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
LSMEM1Q8N8F7 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC16.05■□□□□ 0.16
LSMEM1Q8N8F7 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms