Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC17.31■□□□□ 0.36
TRAM1L1Q8N609 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC17.31■□□□□ 0.36
TRAM1L1Q8N609 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC17.31■□□□□ 0.36
TRAM1L1Q8N609 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC17.31■□□□□ 0.36
TRAM1L1Q8N609 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC17.31■□□□□ 0.36
TRAM1L1Q8N609 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRAM1L1Q8N609 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC17.31■□□□□ 0.36
TRAM1L1Q8N609 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRAM1L1Q8N609 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.3■□□□□ 0.36
TRAM1L1Q8N609 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRAM1L1Q8N609 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC17.3■□□□□ 0.36
TRAM1L1Q8N609 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC17.3■□□□□ 0.36
TRAM1L1Q8N609 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC17.3■□□□□ 0.36
TRAM1L1Q8N609 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRAM1L1Q8N609 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TRAM1L1Q8N609 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
TRAM1L1Q8N609 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC17.3■□□□□ 0.36
TRAM1L1Q8N609 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC17.3■□□□□ 0.36
TRAM1L1Q8N609 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRAM1L1Q8N609 MCC-208ENST00000514701 2855 ntTSL 2 BASIC17.3■□□□□ 0.36
TRAM1L1Q8N609 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC17.3■□□□□ 0.36
TRAM1L1Q8N609 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC17.3■□□□□ 0.36
TRAM1L1Q8N609 KRT18P67-201ENST00000432816 1264 ntBASIC17.3■□□□□ 0.36
TRAM1L1Q8N609 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC17.3■□□□□ 0.36
TRAM1L1Q8N609 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC17.3■□□□□ 0.36
TRAM1L1Q8N609 AF186996.4-201ENST00000467186 377 ntBASIC17.3■□□□□ 0.36
TRAM1L1Q8N609 S100A2-206ENST00000497140 697 ntTSL 2 BASIC17.3■□□□□ 0.36
TRAM1L1Q8N609 MSRA-206ENST00000521209 814 ntTSL 3 BASIC17.3■□□□□ 0.36
TRAM1L1Q8N609 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC17.3■□□□□ 0.36
TRAM1L1Q8N609 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC17.3■□□□□ 0.36
TRAM1L1Q8N609 MTDHP4-201ENST00000600287 670 ntBASIC17.3■□□□□ 0.36
TRAM1L1Q8N609 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC17.3■□□□□ 0.36
TRAM1L1Q8N609 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRAM1L1Q8N609 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
TRAM1L1Q8N609 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC17.3■□□□□ 0.36
TRAM1L1Q8N609 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC17.3■□□□□ 0.36
TRAM1L1Q8N609 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRAM1L1Q8N609 AC004817.3-201ENST00000602957 2129 ntBASIC17.3■□□□□ 0.36
TRAM1L1Q8N609 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRAM1L1Q8N609 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRAM1L1Q8N609 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRAM1L1Q8N609 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRAM1L1Q8N609 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRAM1L1Q8N609 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
TRAM1L1Q8N609 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRAM1L1Q8N609 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC17.29■□□□□ 0.36
TRAM1L1Q8N609 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TRAM1L1Q8N609 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRAM1L1Q8N609 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC17.29■□□□□ 0.36
TRAM1L1Q8N609 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
TRAM1L1Q8N609 LINC00896-202ENST00000609602 2128 ntBASIC17.29■□□□□ 0.36
TRAM1L1Q8N609 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TRAM1L1Q8N609 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
TRAM1L1Q8N609 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
TRAM1L1Q8N609 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TRAM1L1Q8N609 RAB17-203ENST00000409576 466 ntTSL 3 BASIC17.29■□□□□ 0.36
TRAM1L1Q8N609 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRAM1L1Q8N609 AC018712.1-201ENST00000455767 687 ntBASIC17.29■□□□□ 0.36
TRAM1L1Q8N609 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC17.29■□□□□ 0.36
TRAM1L1Q8N609 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC17.29■□□□□ 0.36
TRAM1L1Q8N609 RNPS1P1-201ENST00000507437 918 ntBASIC17.29■□□□□ 0.36
TRAM1L1Q8N609 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC17.29■□□□□ 0.36
TRAM1L1Q8N609 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC17.29■□□□□ 0.36
TRAM1L1Q8N609 RNF151-202ENST00000569210 853 ntTSL 2 BASIC17.29■□□□□ 0.36
TRAM1L1Q8N609 PAM16-208ENST00000573553 722 ntTSL 2 BASIC17.29■□□□□ 0.36
TRAM1L1Q8N609 CYB561-217ENST00000582997 877 ntTSL 5 BASIC17.29■□□□□ 0.36
TRAM1L1Q8N609 AC025062.2-201ENST00000605477 670 ntBASIC17.29■□□□□ 0.36
TRAM1L1Q8N609 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRAM1L1Q8N609 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRAM1L1Q8N609 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
TRAM1L1Q8N609 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
TRAM1L1Q8N609 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRAM1L1Q8N609 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.29■□□□□ 0.36
TRAM1L1Q8N609 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRAM1L1Q8N609 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
TRAM1L1Q8N609 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRAM1L1Q8N609 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
TRAM1L1Q8N609 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRAM1L1Q8N609 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRAM1L1Q8N609 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRAM1L1Q8N609 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRAM1L1Q8N609 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
TRAM1L1Q8N609 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC17.28■□□□□ 0.36
TRAM1L1Q8N609 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRAM1L1Q8N609 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
TRAM1L1Q8N609 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TRAM1L1Q8N609 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
TRAM1L1Q8N609 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC17.28■□□□□ 0.36
TRAM1L1Q8N609 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRAM1L1Q8N609 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
TRAM1L1Q8N609 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRAM1L1Q8N609 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRAM1L1Q8N609 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRAM1L1Q8N609 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRAM1L1Q8N609 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC17.28■□□□□ 0.36
TRAM1L1Q8N609 MED22-202ENST00000371999 987 ntTSL 3 BASIC17.28■□□□□ 0.36
TRAM1L1Q8N609 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC17.28■□□□□ 0.36
TRAM1L1Q8N609 PPIE-208ENST00000470213 927 ntTSL 3 BASIC17.28■□□□□ 0.36
TRAM1L1Q8N609 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRAM1L1Q8N609 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms