Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC18.43■□□□□ 0.54
SCUBE3Q8IX30 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC18.43■□□□□ 0.54
SCUBE3Q8IX30 AC073592.5-201ENST00000624854 528 ntBASIC18.43■□□□□ 0.54
SCUBE3Q8IX30 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC18.43■□□□□ 0.54
SCUBE3Q8IX30 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SCUBE3Q8IX30 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SCUBE3Q8IX30 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
SCUBE3Q8IX30 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SCUBE3Q8IX30 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SCUBE3Q8IX30 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC18.43■□□□□ 0.54
SCUBE3Q8IX30 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC18.43■□□□□ 0.54
SCUBE3Q8IX30 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC18.43■□□□□ 0.54
SCUBE3Q8IX30 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
SCUBE3Q8IX30 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SCUBE3Q8IX30 EML3-212ENST00000494176 2901 ntTSL 2 BASIC18.43■□□□□ 0.54
SCUBE3Q8IX30 EML3-216ENST00000529309 2909 ntTSL 2 BASIC18.43■□□□□ 0.54
SCUBE3Q8IX30 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC18.42■□□□□ 0.54
SCUBE3Q8IX30 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SCUBE3Q8IX30 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC18.42■□□□□ 0.54
SCUBE3Q8IX30 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SCUBE3Q8IX30 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC18.42■□□□□ 0.54
SCUBE3Q8IX30 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC18.42■□□□□ 0.54
SCUBE3Q8IX30 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SCUBE3Q8IX30 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SCUBE3Q8IX30 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SCUBE3Q8IX30 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SCUBE3Q8IX30 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC18.42■□□□□ 0.54
SCUBE3Q8IX30 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
SCUBE3Q8IX30 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC18.42■□□□□ 0.54
SCUBE3Q8IX30 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SCUBE3Q8IX30 RN7SL510P-201ENST00000581311 263 ntBASIC18.42■□□□□ 0.54
SCUBE3Q8IX30 STK25P1-201ENST00000585406 838 ntBASIC18.42■□□□□ 0.54
SCUBE3Q8IX30 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SCUBE3Q8IX30 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SCUBE3Q8IX30 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SCUBE3Q8IX30 AL139327.4-201ENST00000612362 153 ntBASIC18.42■□□□□ 0.54
SCUBE3Q8IX30 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SCUBE3Q8IX30 REXO1L6P-202ENST00000619970 1078 ntBASIC18.42■□□□□ 0.54
SCUBE3Q8IX30 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SCUBE3Q8IX30 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
SCUBE3Q8IX30 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SCUBE3Q8IX30 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
SCUBE3Q8IX30 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.42■□□□□ 0.54
SCUBE3Q8IX30 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SCUBE3Q8IX30 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SCUBE3Q8IX30 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC18.42■□□□□ 0.54
SCUBE3Q8IX30 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
SCUBE3Q8IX30 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC18.42■□□□□ 0.54
SCUBE3Q8IX30 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC18.42■□□□□ 0.54
SCUBE3Q8IX30 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SCUBE3Q8IX30 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
SCUBE3Q8IX30 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC18.42■□□□□ 0.54
SCUBE3Q8IX30 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SCUBE3Q8IX30 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SCUBE3Q8IX30 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
SCUBE3Q8IX30 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SCUBE3Q8IX30 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC18.41■□□□□ 0.54
SCUBE3Q8IX30 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SCUBE3Q8IX30 BOC-212ENST00000485230 2173 ntTSL 2 BASIC18.41■□□□□ 0.54
SCUBE3Q8IX30 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC18.41■□□□□ 0.54
SCUBE3Q8IX30 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SCUBE3Q8IX30 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
SCUBE3Q8IX30 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SCUBE3Q8IX30 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SCUBE3Q8IX30 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC18.41■□□□□ 0.54
SCUBE3Q8IX30 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC18.41■□□□□ 0.54
SCUBE3Q8IX30 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SCUBE3Q8IX30 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC18.41■□□□□ 0.54
SCUBE3Q8IX30 AKR1C7P-201ENST00000305623 895 ntBASIC18.41■□□□□ 0.54
SCUBE3Q8IX30 MYCLP1-201ENST00000372451 1075 ntBASIC18.41■□□□□ 0.54
SCUBE3Q8IX30 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SCUBE3Q8IX30 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SCUBE3Q8IX30 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
SCUBE3Q8IX30 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
SCUBE3Q8IX30 EMBP1-201ENST00000458200 901 ntBASIC18.41■□□□□ 0.54
SCUBE3Q8IX30 AC106795.1-205ENST00000512851 1056 ntBASIC18.41■□□□□ 0.54
SCUBE3Q8IX30 AF238378.1-201ENST00000526806 358 ntBASIC18.41■□□□□ 0.54
SCUBE3Q8IX30 MTDHP3-201ENST00000594186 672 ntBASIC18.41■□□□□ 0.54
SCUBE3Q8IX30 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SCUBE3Q8IX30 AC023511.2-201ENST00000618803 211 ntBASIC18.41■□□□□ 0.54
SCUBE3Q8IX30 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
SCUBE3Q8IX30 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC18.41■□□□□ 0.54
SCUBE3Q8IX30 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SCUBE3Q8IX30 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC18.41■□□□□ 0.54
SCUBE3Q8IX30 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SCUBE3Q8IX30 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SCUBE3Q8IX30 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SCUBE3Q8IX30 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
SCUBE3Q8IX30 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SCUBE3Q8IX30 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC18.4■□□□□ 0.54
SCUBE3Q8IX30 TPR-209ENST00000613151 2478 ntTSL 5 BASIC18.4■□□□□ 0.54
SCUBE3Q8IX30 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
SCUBE3Q8IX30 AL138688.1-201ENST00000624851 1594 ntBASIC18.4■□□□□ 0.54
SCUBE3Q8IX30 AC004870.1-201ENST00000315132 882 ntBASIC18.4■□□□□ 0.54
SCUBE3Q8IX30 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SCUBE3Q8IX30 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SCUBE3Q8IX30 AP000347.1-202ENST00000435868 847 ntBASIC18.4■□□□□ 0.54
SCUBE3Q8IX30 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC18.4■□□□□ 0.54
SCUBE3Q8IX30 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC18.4■□□□□ 0.54
SCUBE3Q8IX30 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms