Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC15.92■□□□□ 0.14
CROCCP3Q8IVE0 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC15.92■□□□□ 0.14
CROCCP3Q8IVE0 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
CROCCP3Q8IVE0 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CROCCP3Q8IVE0 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
CROCCP3Q8IVE0 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC15.92■□□□□ 0.14
CROCCP3Q8IVE0 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC15.92■□□□□ 0.14
CROCCP3Q8IVE0 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC15.92■□□□□ 0.14
CROCCP3Q8IVE0 KRT18P5-201ENST00000436075 1291 ntBASIC15.92■□□□□ 0.14
CROCCP3Q8IVE0 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC15.92■□□□□ 0.14
CROCCP3Q8IVE0 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC15.92■□□□□ 0.14
CROCCP3Q8IVE0 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CROCCP3Q8IVE0 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC15.92■□□□□ 0.14
CROCCP3Q8IVE0 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CROCCP3Q8IVE0 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CROCCP3Q8IVE0 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC15.92■□□□□ 0.14
CROCCP3Q8IVE0 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CROCCP3Q8IVE0 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC15.92■□□□□ 0.14
CROCCP3Q8IVE0 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CROCCP3Q8IVE0 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
CROCCP3Q8IVE0 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
CROCCP3Q8IVE0 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
CROCCP3Q8IVE0 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC15.92■□□□□ 0.14
CROCCP3Q8IVE0 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CROCCP3Q8IVE0 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CROCCP3Q8IVE0 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CROCCP3Q8IVE0 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC15.92■□□□□ 0.14
CROCCP3Q8IVE0 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CROCCP3Q8IVE0 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CROCCP3Q8IVE0 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CROCCP3Q8IVE0 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CROCCP3Q8IVE0 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC15.91■□□□□ 0.14
CROCCP3Q8IVE0 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
CROCCP3Q8IVE0 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC15.91■□□□□ 0.14
CROCCP3Q8IVE0 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
CROCCP3Q8IVE0 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CROCCP3Q8IVE0 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CROCCP3Q8IVE0 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC15.91■□□□□ 0.14
CROCCP3Q8IVE0 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC15.91■□□□□ 0.14
CROCCP3Q8IVE0 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CROCCP3Q8IVE0 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CROCCP3Q8IVE0 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC15.91■□□□□ 0.14
CROCCP3Q8IVE0 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CROCCP3Q8IVE0 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC15.91■□□□□ 0.14
CROCCP3Q8IVE0 AC091874.3-201ENST00000512672 1195 ntBASIC15.91■□□□□ 0.14
CROCCP3Q8IVE0 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC15.91■□□□□ 0.14
CROCCP3Q8IVE0 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CROCCP3Q8IVE0 PNMA6B-201ENST00000538162 1200 ntBASIC15.91■□□□□ 0.14
CROCCP3Q8IVE0 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CROCCP3Q8IVE0 AC060766.5-201ENST00000590539 871 ntBASIC15.91■□□□□ 0.14
CROCCP3Q8IVE0 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC15.91■□□□□ 0.14
CROCCP3Q8IVE0 AC092118.2-201ENST00000613495 667 ntBASIC15.91■□□□□ 0.14
CROCCP3Q8IVE0 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC15.91■□□□□ 0.14
CROCCP3Q8IVE0 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CROCCP3Q8IVE0 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CROCCP3Q8IVE0 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
CROCCP3Q8IVE0 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC15.91■□□□□ 0.14
CROCCP3Q8IVE0 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
CROCCP3Q8IVE0 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CROCCP3Q8IVE0 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC15.91■□□□□ 0.14
CROCCP3Q8IVE0 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
CROCCP3Q8IVE0 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CROCCP3Q8IVE0 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CROCCP3Q8IVE0 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CROCCP3Q8IVE0 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CROCCP3Q8IVE0 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
CROCCP3Q8IVE0 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CROCCP3Q8IVE0 POLL-206ENST00000370172 2308 ntTSL 2 BASIC15.9■□□□□ 0.14
CROCCP3Q8IVE0 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC15.9■□□□□ 0.14
CROCCP3Q8IVE0 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
CROCCP3Q8IVE0 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC15.9■□□□□ 0.14
CROCCP3Q8IVE0 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CROCCP3Q8IVE0 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC15.9■□□□□ 0.14
CROCCP3Q8IVE0 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC15.9■□□□□ 0.14
CROCCP3Q8IVE0 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
CROCCP3Q8IVE0 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
CROCCP3Q8IVE0 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CROCCP3Q8IVE0 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
CROCCP3Q8IVE0 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
CROCCP3Q8IVE0 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
CROCCP3Q8IVE0 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CROCCP3Q8IVE0 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CROCCP3Q8IVE0 ME3-201ENST00000323418 1068 ntTSL 5 BASIC15.9■□□□□ 0.14
CROCCP3Q8IVE0 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC15.9■□□□□ 0.14
CROCCP3Q8IVE0 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC15.9■□□□□ 0.14
CROCCP3Q8IVE0 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
CROCCP3Q8IVE0 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CROCCP3Q8IVE0 SLC29A4P2-201ENST00000504749 1089 ntBASIC15.9■□□□□ 0.14
CROCCP3Q8IVE0 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC15.9■□□□□ 0.14
CROCCP3Q8IVE0 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
CROCCP3Q8IVE0 AC008687.6-201ENST00000596318 630 ntBASIC15.9■□□□□ 0.14
CROCCP3Q8IVE0 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CROCCP3Q8IVE0 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CROCCP3Q8IVE0 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
CROCCP3Q8IVE0 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CROCCP3Q8IVE0 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC15.9■□□□□ 0.14
CROCCP3Q8IVE0 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC15.9■□□□□ 0.14
CROCCP3Q8IVE0 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC15.9■□□□□ 0.14
CROCCP3Q8IVE0 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CROCCP3Q8IVE0 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC15.9■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms