Protein–RNA interactions for Protein: Q8IUI8

CRLF3, Cytokine receptor-like factor 3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3Q8IUI8 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
CRLF3Q8IUI8 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CRLF3Q8IUI8 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CRLF3Q8IUI8 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CRLF3Q8IUI8 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CRLF3Q8IUI8 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC17.53■□□□□ 0.4
CRLF3Q8IUI8 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC17.53■□□□□ 0.4
CRLF3Q8IUI8 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CRLF3Q8IUI8 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CRLF3Q8IUI8 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CRLF3Q8IUI8 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CRLF3Q8IUI8 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CRLF3Q8IUI8 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
CRLF3Q8IUI8 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC17.53■□□□□ 0.4
CRLF3Q8IUI8 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC17.53■□□□□ 0.4
CRLF3Q8IUI8 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
CRLF3Q8IUI8 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC17.53■□□□□ 0.4
CRLF3Q8IUI8 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CRLF3Q8IUI8 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CRLF3Q8IUI8 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CRLF3Q8IUI8 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CRLF3Q8IUI8 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC17.53■□□□□ 0.4
CRLF3Q8IUI8 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC17.53■□□□□ 0.4
CRLF3Q8IUI8 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
CRLF3Q8IUI8 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC17.53■□□□□ 0.4
CRLF3Q8IUI8 AC063952.2-201ENST00000498792 1227 ntBASIC17.53■□□□□ 0.4
CRLF3Q8IUI8 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC17.53■□□□□ 0.4
CRLF3Q8IUI8 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CRLF3Q8IUI8 AC022616.7-201ENST00000525383 220 ntBASIC17.53■□□□□ 0.4
CRLF3Q8IUI8 LTBR-211ENST00000543190 785 ntTSL 3 BASIC17.53■□□□□ 0.4
CRLF3Q8IUI8 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC17.53■□□□□ 0.4
CRLF3Q8IUI8 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC17.53■□□□□ 0.4
CRLF3Q8IUI8 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC17.53■□□□□ 0.4
CRLF3Q8IUI8 CR769767.2-201ENST00000622735 460 ntBASIC17.53■□□□□ 0.4
CRLF3Q8IUI8 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
CRLF3Q8IUI8 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
CRLF3Q8IUI8 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC17.53■□□□□ 0.4
CRLF3Q8IUI8 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CRLF3Q8IUI8 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
CRLF3Q8IUI8 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CRLF3Q8IUI8 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CRLF3Q8IUI8 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CRLF3Q8IUI8 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC17.53■□□□□ 0.4
CRLF3Q8IUI8 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CRLF3Q8IUI8 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
CRLF3Q8IUI8 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CRLF3Q8IUI8 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC17.52■□□□□ 0.4
CRLF3Q8IUI8 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CRLF3Q8IUI8 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC17.52■□□□□ 0.4
CRLF3Q8IUI8 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC17.52■□□□□ 0.4
CRLF3Q8IUI8 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC17.52■□□□□ 0.4
CRLF3Q8IUI8 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
CRLF3Q8IUI8 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.4
CRLF3Q8IUI8 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
CRLF3Q8IUI8 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CRLF3Q8IUI8 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
CRLF3Q8IUI8 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CRLF3Q8IUI8 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CRLF3Q8IUI8 ANKRD20A18P-201ENST00000359341 492 ntBASIC17.52■□□□□ 0.4
CRLF3Q8IUI8 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CRLF3Q8IUI8 RNF152P1-201ENST00000397754 604 ntBASIC17.52■□□□□ 0.4
CRLF3Q8IUI8 AGGF1P2-201ENST00000426656 2106 ntBASIC17.52■□□□□ 0.4
CRLF3Q8IUI8 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC17.52■□□□□ 0.4
CRLF3Q8IUI8 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CRLF3Q8IUI8 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC17.52■□□□□ 0.4
CRLF3Q8IUI8 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CRLF3Q8IUI8 REXO1L11P-201ENST00000620964 1927 ntBASIC17.52■□□□□ 0.4
CRLF3Q8IUI8 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CRLF3Q8IUI8 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CRLF3Q8IUI8 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CRLF3Q8IUI8 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC17.52■□□□□ 0.39
CRLF3Q8IUI8 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CRLF3Q8IUI8 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
CRLF3Q8IUI8 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC17.52■□□□□ 0.39
CRLF3Q8IUI8 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CRLF3Q8IUI8 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CRLF3Q8IUI8 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CRLF3Q8IUI8 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CRLF3Q8IUI8 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CRLF3Q8IUI8 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CRLF3Q8IUI8 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CRLF3Q8IUI8 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.39
CRLF3Q8IUI8 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CRLF3Q8IUI8 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
CRLF3Q8IUI8 PCDHA14-201ENST00000506751 2298 ntBASIC17.51■□□□□ 0.39
CRLF3Q8IUI8 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
CRLF3Q8IUI8 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CRLF3Q8IUI8 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CRLF3Q8IUI8 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
CRLF3Q8IUI8 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CRLF3Q8IUI8 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CRLF3Q8IUI8 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CRLF3Q8IUI8 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC17.51■□□□□ 0.39
CRLF3Q8IUI8 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC17.51■□□□□ 0.39
CRLF3Q8IUI8 AC105020.1-201ENST00000435356 2205 ntBASIC17.51■□□□□ 0.39
CRLF3Q8IUI8 PCDHB19P-201ENST00000570871 2371 ntBASIC17.51■□□□□ 0.39
CRLF3Q8IUI8 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
CRLF3Q8IUI8 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CRLF3Q8IUI8 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CRLF3Q8IUI8 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms