Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 PENK-208ENST00000523051 772 ntTSL 5 BASIC17.2■□□□□ 0.34
LRRTM4Q86VH4 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC17.2■□□□□ 0.34
LRRTM4Q86VH4 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC17.2■□□□□ 0.34
LRRTM4Q86VH4 PAM16-208ENST00000573553 722 ntTSL 2 BASIC17.2■□□□□ 0.34
LRRTM4Q86VH4 PNMT-203ENST00000581428 677 ntTSL 2 BASIC17.2■□□□□ 0.34
LRRTM4Q86VH4 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC17.2■□□□□ 0.34
LRRTM4Q86VH4 COPE-211ENST00000600932 1144 ntTSL 5 BASIC17.2■□□□□ 0.34
LRRTM4Q86VH4 AC025062.2-201ENST00000605477 670 ntBASIC17.2■□□□□ 0.34
LRRTM4Q86VH4 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC17.2■□□□□ 0.34
LRRTM4Q86VH4 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC17.2■□□□□ 0.34
LRRTM4Q86VH4 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRRTM4Q86VH4 AC005332.8-201ENST00000622750 2735 ntBASIC17.2■□□□□ 0.34
LRRTM4Q86VH4 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC17.2■□□□□ 0.34
LRRTM4Q86VH4 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LRRTM4Q86VH4 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LRRTM4Q86VH4 AC148477.5-201ENST00000625164 1645 ntBASIC17.2■□□□□ 0.34
LRRTM4Q86VH4 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC17.2■□□□□ 0.34
LRRTM4Q86VH4 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LRRTM4Q86VH4 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRRTM4Q86VH4 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.2■□□□□ 0.34
LRRTM4Q86VH4 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LRRTM4Q86VH4 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LRRTM4Q86VH4 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRRTM4Q86VH4 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRRTM4Q86VH4 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
LRRTM4Q86VH4 AC133963.1-201ENST00000504166 1679 ntBASIC17.2■□□□□ 0.34
LRRTM4Q86VH4 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LRRTM4Q86VH4 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
LRRTM4Q86VH4 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC17.19■□□□□ 0.34
LRRTM4Q86VH4 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LRRTM4Q86VH4 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC17.19■□□□□ 0.34
LRRTM4Q86VH4 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LRRTM4Q86VH4 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC17.19■□□□□ 0.34
LRRTM4Q86VH4 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC17.19■□□□□ 0.34
LRRTM4Q86VH4 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC17.19■□□□□ 0.34
LRRTM4Q86VH4 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LRRTM4Q86VH4 AC134043.2-201ENST00000624206 2238 ntBASIC17.19■□□□□ 0.34
LRRTM4Q86VH4 GNAS-203ENST00000306120 1878 ntBASIC17.19■□□□□ 0.34
LRRTM4Q86VH4 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LRRTM4Q86VH4 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LRRTM4Q86VH4 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LRRTM4Q86VH4 RPS2P28-201ENST00000314255 741 ntBASIC17.19■□□□□ 0.34
LRRTM4Q86VH4 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC17.19■□□□□ 0.34
LRRTM4Q86VH4 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LRRTM4Q86VH4 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
LRRTM4Q86VH4 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC17.19■□□□□ 0.34
LRRTM4Q86VH4 AL031284.1-201ENST00000419297 478 ntBASIC17.19■□□□□ 0.34
LRRTM4Q86VH4 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC17.19■□□□□ 0.34
LRRTM4Q86VH4 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC17.19■□□□□ 0.34
LRRTM4Q86VH4 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
LRRTM4Q86VH4 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC17.19■□□□□ 0.34
LRRTM4Q86VH4 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC17.19■□□□□ 0.34
LRRTM4Q86VH4 OR7E14P-202ENST00000530490 1290 ntBASIC17.19■□□□□ 0.34
LRRTM4Q86VH4 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LRRTM4Q86VH4 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC17.19■□□□□ 0.34
LRRTM4Q86VH4 RNF151-202ENST00000569210 853 ntTSL 2 BASIC17.19■□□□□ 0.34
LRRTM4Q86VH4 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC17.19■□□□□ 0.34
LRRTM4Q86VH4 AP001005.1-201ENST00000571755 1248 ntBASIC17.19■□□□□ 0.34
LRRTM4Q86VH4 AC004817.3-201ENST00000602957 2129 ntBASIC17.19■□□□□ 0.34
LRRTM4Q86VH4 AL139327.4-201ENST00000612362 153 ntBASIC17.19■□□□□ 0.34
LRRTM4Q86VH4 AC148477.8-201ENST00000624298 468 ntBASIC17.19■□□□□ 0.34
LRRTM4Q86VH4 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LRRTM4Q86VH4 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC17.19■□□□□ 0.34
LRRTM4Q86VH4 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC17.19■□□□□ 0.34
LRRTM4Q86VH4 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
LRRTM4Q86VH4 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
LRRTM4Q86VH4 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LRRTM4Q86VH4 NOC2LP2-201ENST00000407594 1944 ntBASIC17.19■□□□□ 0.34
LRRTM4Q86VH4 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
LRRTM4Q86VH4 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LRRTM4Q86VH4 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
LRRTM4Q86VH4 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LRRTM4Q86VH4 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LRRTM4Q86VH4 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LRRTM4Q86VH4 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRRTM4Q86VH4 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRRTM4Q86VH4 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC17.18■□□□□ 0.34
LRRTM4Q86VH4 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC17.18■□□□□ 0.34
LRRTM4Q86VH4 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.18■□□□□ 0.34
LRRTM4Q86VH4 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRRTM4Q86VH4 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRRTM4Q86VH4 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC17.18■□□□□ 0.34
LRRTM4Q86VH4 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRRTM4Q86VH4 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRRTM4Q86VH4 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC17.18■□□□□ 0.34
LRRTM4Q86VH4 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRRTM4Q86VH4 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
LRRTM4Q86VH4 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRRTM4Q86VH4 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRRTM4Q86VH4 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
LRRTM4Q86VH4 RPS2P1-201ENST00000434010 821 ntBASIC17.18■□□□□ 0.34
LRRTM4Q86VH4 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC17.18■□□□□ 0.34
LRRTM4Q86VH4 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC17.18■□□□□ 0.34
LRRTM4Q86VH4 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
LRRTM4Q86VH4 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC17.18■□□□□ 0.34
LRRTM4Q86VH4 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
LRRTM4Q86VH4 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC17.18■□□□□ 0.34
LRRTM4Q86VH4 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRRTM4Q86VH4 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRRTM4Q86VH4 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 69.5 ms