Protein–RNA interactions for Protein: Q7Z7F7

MRPL55, 39S ribosomal protein L55, mitochondrial, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55Q7Z7F7 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC11.32□□□□□ -0.6
MRPL55Q7Z7F7 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC11.32□□□□□ -0.6
MRPL55Q7Z7F7 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC11.32□□□□□ -0.6
MRPL55Q7Z7F7 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
MRPL55Q7Z7F7 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
MRPL55Q7Z7F7 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC11.32□□□□□ -0.6
MRPL55Q7Z7F7 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
MRPL55Q7Z7F7 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
MRPL55Q7Z7F7 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
MRPL55Q7Z7F7 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC11.32□□□□□ -0.6
MRPL55Q7Z7F7 AL138688.1-201ENST00000624851 1594 ntBASIC11.32□□□□□ -0.6
MRPL55Q7Z7F7 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
MRPL55Q7Z7F7 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
MRPL55Q7Z7F7 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
MRPL55Q7Z7F7 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
MRPL55Q7Z7F7 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
MRPL55Q7Z7F7 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC11.32□□□□□ -0.6
MRPL55Q7Z7F7 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC11.32□□□□□ -0.6
MRPL55Q7Z7F7 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC11.32□□□□□ -0.6
MRPL55Q7Z7F7 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC11.32□□□□□ -0.6
MRPL55Q7Z7F7 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
MRPL55Q7Z7F7 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC11.32□□□□□ -0.6
MRPL55Q7Z7F7 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
MRPL55Q7Z7F7 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
MRPL55Q7Z7F7 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
MRPL55Q7Z7F7 HARS-201ENST00000307633 1780 ntTSL 2 BASIC11.31□□□□□ -0.6
MRPL55Q7Z7F7 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
MRPL55Q7Z7F7 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC11.31□□□□□ -0.6
MRPL55Q7Z7F7 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC11.31□□□□□ -0.6
MRPL55Q7Z7F7 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC11.31□□□□□ -0.6
MRPL55Q7Z7F7 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
MRPL55Q7Z7F7 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
MRPL55Q7Z7F7 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
MRPL55Q7Z7F7 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
MRPL55Q7Z7F7 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
MRPL55Q7Z7F7 AL391807.1-203ENST00000604392 2365 ntBASIC11.31□□□□□ -0.6
MRPL55Q7Z7F7 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
MRPL55Q7Z7F7 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
MRPL55Q7Z7F7 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC11.31□□□□□ -0.6
MRPL55Q7Z7F7 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
MRPL55Q7Z7F7 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC11.31□□□□□ -0.6
MRPL55Q7Z7F7 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
MRPL55Q7Z7F7 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
MRPL55Q7Z7F7 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
MRPL55Q7Z7F7 DDT-203ENST00000403754 569 ntTSL 3 BASIC11.31□□□□□ -0.6
MRPL55Q7Z7F7 DDT-206ENST00000430101 573 ntTSL 2 BASIC11.31□□□□□ -0.6
MRPL55Q7Z7F7 AL137013.1-201ENST00000432946 1228 ntBASIC11.31□□□□□ -0.6
MRPL55Q7Z7F7 DDX43P3-201ENST00000441064 443 ntBASIC11.31□□□□□ -0.6
MRPL55Q7Z7F7 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC11.31□□□□□ -0.6
MRPL55Q7Z7F7 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC11.31□□□□□ -0.6
MRPL55Q7Z7F7 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC11.31□□□□□ -0.6
MRPL55Q7Z7F7 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC11.31□□□□□ -0.6
MRPL55Q7Z7F7 TK1-205ENST00000590862 642 ntTSL 3 BASIC11.31□□□□□ -0.6
MRPL55Q7Z7F7 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
MRPL55Q7Z7F7 AC005363.2-201ENST00000618631 242 ntBASIC11.31□□□□□ -0.6
MRPL55Q7Z7F7 AC066615.1-201ENST00000640911 628 ntBASIC11.31□□□□□ -0.6
MRPL55Q7Z7F7 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
MRPL55Q7Z7F7 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
MRPL55Q7Z7F7 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC11.31□□□□□ -0.6
MRPL55Q7Z7F7 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC11.31□□□□□ -0.6
MRPL55Q7Z7F7 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC11.31□□□□□ -0.6
MRPL55Q7Z7F7 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
MRPL55Q7Z7F7 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC11.31□□□□□ -0.6
MRPL55Q7Z7F7 LGALS8-AS1-201ENST00000487567 1457 ntBASIC11.31□□□□□ -0.6
MRPL55Q7Z7F7 HLA-J-201ENST00000462773 1622 ntBASIC11.31□□□□□ -0.6
MRPL55Q7Z7F7 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
MRPL55Q7Z7F7 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC11.31□□□□□ -0.6
MRPL55Q7Z7F7 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
MRPL55Q7Z7F7 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC11.31□□□□□ -0.6
MRPL55Q7Z7F7 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
MRPL55Q7Z7F7 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC11.3□□□□□ -0.6
MRPL55Q7Z7F7 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
MRPL55Q7Z7F7 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
MRPL55Q7Z7F7 AC139713.2-201ENST00000641328 2723 ntBASIC11.3□□□□□ -0.6
MRPL55Q7Z7F7 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC11.3□□□□□ -0.6
MRPL55Q7Z7F7 AC009949.1-201ENST00000623048 1830 ntBASIC11.3□□□□□ -0.6
MRPL55Q7Z7F7 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC11.3□□□□□ -0.6
MRPL55Q7Z7F7 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC11.3□□□□□ -0.6
MRPL55Q7Z7F7 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
MRPL55Q7Z7F7 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
MRPL55Q7Z7F7 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC11.3□□□□□ -0.6
MRPL55Q7Z7F7 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
MRPL55Q7Z7F7 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC11.3□□□□□ -0.6
MRPL55Q7Z7F7 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC11.3□□□□□ -0.6
MRPL55Q7Z7F7 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
MRPL55Q7Z7F7 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
MRPL55Q7Z7F7 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC11.3□□□□□ -0.6
MRPL55Q7Z7F7 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC11.3□□□□□ -0.6
MRPL55Q7Z7F7 TSPY12P-201ENST00000421279 868 ntBASIC11.3□□□□□ -0.6
MRPL55Q7Z7F7 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC11.3□□□□□ -0.6
MRPL55Q7Z7F7 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
MRPL55Q7Z7F7 PPOX-214ENST00000535223 664 ntTSL 3 BASIC11.3□□□□□ -0.6
MRPL55Q7Z7F7 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC11.3□□□□□ -0.6
MRPL55Q7Z7F7 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC11.3□□□□□ -0.6
MRPL55Q7Z7F7 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
MRPL55Q7Z7F7 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
MRPL55Q7Z7F7 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC11.3□□□□□ -0.6
MRPL55Q7Z7F7 AC009154.2-201ENST00000621177 724 ntBASIC11.3□□□□□ -0.6
MRPL55Q7Z7F7 LINC01451-201ENST00000623792 534 ntBASIC11.3□□□□□ -0.6
MRPL55Q7Z7F7 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms