Protein–RNA interactions for Protein: Q7Z408

CSMD2, CUB and sushi domain-containing protein 2, humanhuman

Predictions only

Length 3,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2Q7Z408 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CSMD2Q7Z408 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CSMD2Q7Z408 AC119751.2-201ENST00000504529 210 ntBASIC14.62□□□□□ -0.07
CSMD2Q7Z408 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
CSMD2Q7Z408 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC14.62□□□□□ -0.07
CSMD2Q7Z408 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CSMD2Q7Z408 GMCL1P1-201ENST00000463439 1581 ntBASIC14.62□□□□□ -0.07
CSMD2Q7Z408 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CSMD2Q7Z408 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC14.62□□□□□ -0.07
CSMD2Q7Z408 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CSMD2Q7Z408 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CSMD2Q7Z408 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CSMD2Q7Z408 TSSK5P-201ENST00000423978 907 ntBASIC14.61□□□□□ -0.07
CSMD2Q7Z408 CDK4-206ENST00000549606 558 ntTSL 2 BASIC14.61□□□□□ -0.07
CSMD2Q7Z408 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CSMD2Q7Z408 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
CSMD2Q7Z408 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
CSMD2Q7Z408 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CSMD2Q7Z408 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC14.61□□□□□ -0.07
CSMD2Q7Z408 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CSMD2Q7Z408 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CSMD2Q7Z408 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CSMD2Q7Z408 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC14.61□□□□□ -0.07
CSMD2Q7Z408 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC14.61□□□□□ -0.07
CSMD2Q7Z408 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
CSMD2Q7Z408 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
CSMD2Q7Z408 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CSMD2Q7Z408 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CSMD2Q7Z408 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CSMD2Q7Z408 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC14.61□□□□□ -0.07
CSMD2Q7Z408 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
CSMD2Q7Z408 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CSMD2Q7Z408 AL512384.1-201ENST00000406683 331 ntBASIC14.61□□□□□ -0.07
CSMD2Q7Z408 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC14.61□□□□□ -0.07
CSMD2Q7Z408 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CSMD2Q7Z408 MIR6787-201ENST00000616675 61 ntBASIC14.61□□□□□ -0.07
CSMD2Q7Z408 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CSMD2Q7Z408 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CSMD2Q7Z408 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
CSMD2Q7Z408 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
CSMD2Q7Z408 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
CSMD2Q7Z408 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CSMD2Q7Z408 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CSMD2Q7Z408 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC14.6□□□□□ -0.07
CSMD2Q7Z408 GALT-202ENST00000450095 1280 ntTSL 2 BASIC14.6□□□□□ -0.07
CSMD2Q7Z408 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CSMD2Q7Z408 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC14.6□□□□□ -0.07
CSMD2Q7Z408 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC14.6□□□□□ -0.07
CSMD2Q7Z408 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
CSMD2Q7Z408 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CSMD2Q7Z408 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC14.6□□□□□ -0.07
CSMD2Q7Z408 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CSMD2Q7Z408 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CSMD2Q7Z408 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC14.6□□□□□ -0.07
CSMD2Q7Z408 AC116562.4-201ENST00000641316 2276 ntBASIC14.6□□□□□ -0.07
CSMD2Q7Z408 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC14.6□□□□□ -0.07
CSMD2Q7Z408 AC103564.2-201ENST00000432853 1299 ntBASIC14.6□□□□□ -0.07
CSMD2Q7Z408 AC005237.2-201ENST00000434368 219 ntBASIC14.6□□□□□ -0.07
CSMD2Q7Z408 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CSMD2Q7Z408 GPER1-207ENST00000619052 571 ntTSL 2 BASIC14.6□□□□□ -0.07
CSMD2Q7Z408 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CSMD2Q7Z408 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC14.6□□□□□ -0.07
CSMD2Q7Z408 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CSMD2Q7Z408 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CSMD2Q7Z408 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC14.6□□□□□ -0.07
CSMD2Q7Z408 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CSMD2Q7Z408 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CSMD2Q7Z408 AC009477.1-201ENST00000452936 217 ntBASIC14.6□□□□□ -0.07
CSMD2Q7Z408 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC14.6□□□□□ -0.07
CSMD2Q7Z408 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
CSMD2Q7Z408 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC14.6□□□□□ -0.07
CSMD2Q7Z408 FAM86C2P-203ENST00000528684 1004 ntBASIC14.6□□□□□ -0.07
CSMD2Q7Z408 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC14.6□□□□□ -0.07
CSMD2Q7Z408 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
CSMD2Q7Z408 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
CSMD2Q7Z408 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
CSMD2Q7Z408 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
CSMD2Q7Z408 ANO7L1-203ENST00000602586 1720 ntBASIC14.59□□□□□ -0.07
CSMD2Q7Z408 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CSMD2Q7Z408 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CSMD2Q7Z408 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
CSMD2Q7Z408 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CSMD2Q7Z408 KRT17P8-201ENST00000540749 863 ntBASIC14.59□□□□□ -0.07
CSMD2Q7Z408 KRT8P23-201ENST00000560090 1207 ntBASIC14.59□□□□□ -0.07
CSMD2Q7Z408 NAA38-206ENST00000576384 424 ntTSL 2 BASIC14.59□□□□□ -0.07
CSMD2Q7Z408 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CSMD2Q7Z408 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
CSMD2Q7Z408 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CSMD2Q7Z408 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CSMD2Q7Z408 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC14.59□□□□□ -0.07
CSMD2Q7Z408 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
CSMD2Q7Z408 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
CSMD2Q7Z408 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC14.59□□□□□ -0.07
CSMD2Q7Z408 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CSMD2Q7Z408 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
CSMD2Q7Z408 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC14.59□□□□□ -0.07
CSMD2Q7Z408 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC14.59□□□□□ -0.07
CSMD2Q7Z408 AC132938.2-201ENST00000579188 680 ntBASIC14.59□□□□□ -0.07
CSMD2Q7Z408 STK25P1-201ENST00000585406 838 ntBASIC14.59□□□□□ -0.07
CSMD2Q7Z408 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms