Protein–RNA interactions for Protein: Q717R9

CYS1, Cystin-1, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYS1Q717R9 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CYS1Q717R9 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC17.47■□□□□ 0.39
CYS1Q717R9 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CYS1Q717R9 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CYS1Q717R9 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CYS1Q717R9 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
CYS1Q717R9 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
CYS1Q717R9 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC17.47■□□□□ 0.39
CYS1Q717R9 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
CYS1Q717R9 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC17.47■□□□□ 0.39
CYS1Q717R9 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CYS1Q717R9 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CYS1Q717R9 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC17.47■□□□□ 0.39
CYS1Q717R9 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC17.47■□□□□ 0.39
CYS1Q717R9 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CYS1Q717R9 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CYS1Q717R9 AL353593.2-201ENST00000602529 1483 ntBASIC17.46■□□□□ 0.39
CYS1Q717R9 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CYS1Q717R9 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC17.46■□□□□ 0.39
CYS1Q717R9 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC17.46■□□□□ 0.39
CYS1Q717R9 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CYS1Q717R9 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CYS1Q717R9 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CYS1Q717R9 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CYS1Q717R9 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC17.46■□□□□ 0.39
CYS1Q717R9 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC17.46■□□□□ 0.39
CYS1Q717R9 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC17.46■□□□□ 0.39
CYS1Q717R9 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
CYS1Q717R9 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC17.46■□□□□ 0.39
CYS1Q717R9 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC17.46■□□□□ 0.39
CYS1Q717R9 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC17.46■□□□□ 0.39
CYS1Q717R9 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CYS1Q717R9 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
CYS1Q717R9 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CYS1Q717R9 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CYS1Q717R9 HCG11-201ENST00000411553 5696 ntBASIC17.46■□□□□ 0.39
CYS1Q717R9 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CYS1Q717R9 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CYS1Q717R9 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
CYS1Q717R9 UBC-206ENST00000538617 1303 ntTSL 5 BASIC17.46■□□□□ 0.38
CYS1Q717R9 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
CYS1Q717R9 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
CYS1Q717R9 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CYS1Q717R9 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CYS1Q717R9 EGFEM1P-202ENST00000431685 1563 ntBASIC17.45■□□□□ 0.38
CYS1Q717R9 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
CYS1Q717R9 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
CYS1Q717R9 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
CYS1Q717R9 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CYS1Q717R9 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CYS1Q717R9 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
CYS1Q717R9 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CYS1Q717R9 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC17.45■□□□□ 0.38
CYS1Q717R9 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
CYS1Q717R9 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC17.45■□□□□ 0.38
CYS1Q717R9 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CYS1Q717R9 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CYS1Q717R9 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CYS1Q717R9 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CYS1Q717R9 CD9-202ENST00000382515 1229 ntTSL 5 BASIC17.45■□□□□ 0.38
CYS1Q717R9 FAM220CP-201ENST00000395253 831 ntBASIC17.45■□□□□ 0.38
CYS1Q717R9 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC17.45■□□□□ 0.38
CYS1Q717R9 AC063952.2-201ENST00000498792 1227 ntBASIC17.45■□□□□ 0.38
CYS1Q717R9 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC17.45■□□□□ 0.38
CYS1Q717R9 LTBR-211ENST00000543190 785 ntTSL 3 BASIC17.45■□□□□ 0.38
CYS1Q717R9 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC17.45■□□□□ 0.38
CYS1Q717R9 AC090616.6-201ENST00000582640 721 ntBASIC17.45■□□□□ 0.38
CYS1Q717R9 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC17.45■□□□□ 0.38
CYS1Q717R9 AC083849.1-201ENST00000615227 514 ntBASIC17.45■□□□□ 0.38
CYS1Q717R9 VPS72-207ENST00000640458 689 ntTSL 5 BASIC17.45■□□□□ 0.38
CYS1Q717R9 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
CYS1Q717R9 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
CYS1Q717R9 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC17.45■□□□□ 0.38
CYS1Q717R9 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CYS1Q717R9 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CYS1Q717R9 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
CYS1Q717R9 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CYS1Q717R9 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC17.45■□□□□ 0.38
CYS1Q717R9 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC17.45■□□□□ 0.38
CYS1Q717R9 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CYS1Q717R9 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CYS1Q717R9 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
CYS1Q717R9 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CYS1Q717R9 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CYS1Q717R9 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC17.44■□□□□ 0.38
CYS1Q717R9 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CYS1Q717R9 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC17.44■□□□□ 0.38
CYS1Q717R9 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
CYS1Q717R9 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
CYS1Q717R9 AL845331.1-201ENST00000424978 1190 ntBASIC17.44■□□□□ 0.38
CYS1Q717R9 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC17.44■□□□□ 0.38
CYS1Q717R9 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC17.44■□□□□ 0.38
CYS1Q717R9 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CYS1Q717R9 CD320-202ENST00000537716 1119 ntTSL 2 BASIC17.44■□□□□ 0.38
CYS1Q717R9 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC17.44■□□□□ 0.38
CYS1Q717R9 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC17.44■□□□□ 0.38
CYS1Q717R9 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CYS1Q717R9 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CYS1Q717R9 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC17.44■□□□□ 0.38
CYS1Q717R9 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms