Protein–RNA interactions for Protein: Q6S5L8

SHC4, SHC-transforming protein 4, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4Q6S5L8 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
SHC4Q6S5L8 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
SHC4Q6S5L8 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SHC4Q6S5L8 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SHC4Q6S5L8 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
SHC4Q6S5L8 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
SHC4Q6S5L8 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SHC4Q6S5L8 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SHC4Q6S5L8 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SHC4Q6S5L8 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
SHC4Q6S5L8 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC19.75■□□□□ 0.75
SHC4Q6S5L8 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SHC4Q6S5L8 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
SHC4Q6S5L8 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SHC4Q6S5L8 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC19.75■□□□□ 0.75
SHC4Q6S5L8 AC246785.2-201ENST00000432512 513 ntBASIC19.75■□□□□ 0.75
SHC4Q6S5L8 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
SHC4Q6S5L8 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC19.75■□□□□ 0.75
SHC4Q6S5L8 IGHV3-52-201ENST00000519770 353 ntBASIC19.75■□□□□ 0.75
SHC4Q6S5L8 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
SHC4Q6S5L8 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SHC4Q6S5L8 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
SHC4Q6S5L8 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
SHC4Q6S5L8 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SHC4Q6S5L8 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
SHC4Q6S5L8 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC19.75■□□□□ 0.75
SHC4Q6S5L8 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
SHC4Q6S5L8 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC19.75■□□□□ 0.75
SHC4Q6S5L8 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SHC4Q6S5L8 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC19.75■□□□□ 0.75
SHC4Q6S5L8 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SHC4Q6S5L8 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SHC4Q6S5L8 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SHC4Q6S5L8 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC19.74■□□□□ 0.75
SHC4Q6S5L8 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SHC4Q6S5L8 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC19.74■□□□□ 0.75
SHC4Q6S5L8 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC19.74■□□□□ 0.75
SHC4Q6S5L8 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC19.74■□□□□ 0.75
SHC4Q6S5L8 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
SHC4Q6S5L8 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SHC4Q6S5L8 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SHC4Q6S5L8 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SHC4Q6S5L8 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SHC4Q6S5L8 FAM220CP-201ENST00000395253 831 ntBASIC19.74■□□□□ 0.75
SHC4Q6S5L8 CHCHD2P8-201ENST00000429873 447 ntBASIC19.74■□□□□ 0.75
SHC4Q6S5L8 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SHC4Q6S5L8 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC19.74■□□□□ 0.75
SHC4Q6S5L8 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC19.74■□□□□ 0.75
SHC4Q6S5L8 NME3-204ENST00000563498 920 ntTSL 2 BASIC19.74■□□□□ 0.75
SHC4Q6S5L8 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC19.74■□□□□ 0.75
SHC4Q6S5L8 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
SHC4Q6S5L8 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC19.74■□□□□ 0.75
SHC4Q6S5L8 AC116407.4-201ENST00000623319 1061 ntBASIC19.74■□□□□ 0.75
SHC4Q6S5L8 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SHC4Q6S5L8 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
SHC4Q6S5L8 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC19.74■□□□□ 0.75
SHC4Q6S5L8 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
SHC4Q6S5L8 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
SHC4Q6S5L8 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC19.74■□□□□ 0.75
SHC4Q6S5L8 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC19.74■□□□□ 0.75
SHC4Q6S5L8 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC19.74■□□□□ 0.75
SHC4Q6S5L8 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SHC4Q6S5L8 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
SHC4Q6S5L8 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SHC4Q6S5L8 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC19.73■□□□□ 0.75
SHC4Q6S5L8 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC19.73■□□□□ 0.75
SHC4Q6S5L8 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC19.73■□□□□ 0.75
SHC4Q6S5L8 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
SHC4Q6S5L8 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SHC4Q6S5L8 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
SHC4Q6S5L8 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SHC4Q6S5L8 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SHC4Q6S5L8 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
SHC4Q6S5L8 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC19.73■□□□□ 0.75
SHC4Q6S5L8 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SHC4Q6S5L8 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SHC4Q6S5L8 AL049597.2-201ENST00000565575 961 ntBASIC19.73■□□□□ 0.75
SHC4Q6S5L8 STK25P1-201ENST00000585406 838 ntBASIC19.73■□□□□ 0.75
SHC4Q6S5L8 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC19.73■□□□□ 0.75
SHC4Q6S5L8 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC19.73■□□□□ 0.75
SHC4Q6S5L8 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
SHC4Q6S5L8 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC19.73■□□□□ 0.75
SHC4Q6S5L8 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC19.73■□□□□ 0.75
SHC4Q6S5L8 AC124067.4-201ENST00000519691 2379 ntBASIC19.73■□□□□ 0.75
SHC4Q6S5L8 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
SHC4Q6S5L8 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC19.73■□□□□ 0.75
SHC4Q6S5L8 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SHC4Q6S5L8 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC19.73■□□□□ 0.75
SHC4Q6S5L8 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC19.73■□□□□ 0.75
SHC4Q6S5L8 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
SHC4Q6S5L8 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC19.73■□□□□ 0.75
SHC4Q6S5L8 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SHC4Q6S5L8 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC19.73■□□□□ 0.75
SHC4Q6S5L8 AL353593.2-201ENST00000602529 1483 ntBASIC19.73■□□□□ 0.75
SHC4Q6S5L8 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SHC4Q6S5L8 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC19.72■□□□□ 0.75
SHC4Q6S5L8 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
SHC4Q6S5L8 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SHC4Q6S5L8 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SHC4Q6S5L8 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms