Protein–RNA interactions for Protein: Q6NVH7

SWSAP1, ATPase SWSAP1, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SWSAP1Q6NVH7 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SWSAP1Q6NVH7 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SWSAP1Q6NVH7 MIR940-201ENST00000401276 94 ntBASIC19.49■□□□□ 0.71
SWSAP1Q6NVH7 PMS2P1-201ENST00000431037 1228 ntBASIC19.49■□□□□ 0.71
SWSAP1Q6NVH7 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC19.49■□□□□ 0.71
SWSAP1Q6NVH7 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SWSAP1Q6NVH7 AC034105.1-201ENST00000563488 319 ntBASIC19.49■□□□□ 0.71
SWSAP1Q6NVH7 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC19.49■□□□□ 0.71
SWSAP1Q6NVH7 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC19.49■□□□□ 0.71
SWSAP1Q6NVH7 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC19.49■□□□□ 0.71
SWSAP1Q6NVH7 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SWSAP1Q6NVH7 LINC00304-203ENST00000565008 1864 ntBASIC19.49■□□□□ 0.71
SWSAP1Q6NVH7 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
SWSAP1Q6NVH7 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SWSAP1Q6NVH7 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SWSAP1Q6NVH7 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
SWSAP1Q6NVH7 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
SWSAP1Q6NVH7 AL355312.1-201ENST00000407115 2176 ntBASIC19.49■□□□□ 0.71
SWSAP1Q6NVH7 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SWSAP1Q6NVH7 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
SWSAP1Q6NVH7 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SWSAP1Q6NVH7 AC008764.6-201ENST00000595909 2069 ntBASIC19.48■□□□□ 0.71
SWSAP1Q6NVH7 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SWSAP1Q6NVH7 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
SWSAP1Q6NVH7 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SWSAP1Q6NVH7 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SWSAP1Q6NVH7 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC19.48■□□□□ 0.71
SWSAP1Q6NVH7 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC19.48■□□□□ 0.71
SWSAP1Q6NVH7 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SWSAP1Q6NVH7 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SWSAP1Q6NVH7 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC19.48■□□□□ 0.71
SWSAP1Q6NVH7 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
SWSAP1Q6NVH7 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC19.48■□□□□ 0.71
SWSAP1Q6NVH7 AC136632.2-201ENST00000512891 861 ntBASIC19.48■□□□□ 0.71
SWSAP1Q6NVH7 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC19.48■□□□□ 0.71
SWSAP1Q6NVH7 KRT18P58-201ENST00000527480 1120 ntBASIC19.48■□□□□ 0.71
SWSAP1Q6NVH7 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC19.48■□□□□ 0.71
SWSAP1Q6NVH7 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC19.48■□□□□ 0.71
SWSAP1Q6NVH7 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC19.48■□□□□ 0.71
SWSAP1Q6NVH7 Z83851.2-201ENST00000609564 659 ntBASIC19.48■□□□□ 0.71
SWSAP1Q6NVH7 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC19.48■□□□□ 0.71
SWSAP1Q6NVH7 AC005593.1-201ENST00000624894 515 ntBASIC19.48■□□□□ 0.71
SWSAP1Q6NVH7 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC19.48■□□□□ 0.71
SWSAP1Q6NVH7 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC19.48■□□□□ 0.71
SWSAP1Q6NVH7 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC19.48■□□□□ 0.71
SWSAP1Q6NVH7 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SWSAP1Q6NVH7 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC19.47■□□□□ 0.71
SWSAP1Q6NVH7 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SWSAP1Q6NVH7 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
SWSAP1Q6NVH7 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC19.47■□□□□ 0.71
SWSAP1Q6NVH7 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
SWSAP1Q6NVH7 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC19.47■□□□□ 0.71
SWSAP1Q6NVH7 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SWSAP1Q6NVH7 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SWSAP1Q6NVH7 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SWSAP1Q6NVH7 ARTN-206ENST00000472435 402 ntTSL 3 BASIC19.47■□□□□ 0.71
SWSAP1Q6NVH7 POLD2P1-201ENST00000511220 997 ntBASIC19.47■□□□□ 0.71
SWSAP1Q6NVH7 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC19.47■□□□□ 0.71
SWSAP1Q6NVH7 ETFA-208ENST00000559602 792 ntTSL 3 BASIC19.47■□□□□ 0.71
SWSAP1Q6NVH7 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
SWSAP1Q6NVH7 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SWSAP1Q6NVH7 AL139327.4-201ENST00000612362 153 ntBASIC19.47■□□□□ 0.71
SWSAP1Q6NVH7 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
SWSAP1Q6NVH7 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SWSAP1Q6NVH7 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SWSAP1Q6NVH7 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
SWSAP1Q6NVH7 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC19.47■□□□□ 0.71
SWSAP1Q6NVH7 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
SWSAP1Q6NVH7 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SWSAP1Q6NVH7 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
SWSAP1Q6NVH7 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
SWSAP1Q6NVH7 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SWSAP1Q6NVH7 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
SWSAP1Q6NVH7 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SWSAP1Q6NVH7 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SWSAP1Q6NVH7 AC046185.3-201ENST00000623228 1824 ntBASIC19.46■□□□□ 0.71
SWSAP1Q6NVH7 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SWSAP1Q6NVH7 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC19.46■□□□□ 0.71
SWSAP1Q6NVH7 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SWSAP1Q6NVH7 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
SWSAP1Q6NVH7 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC19.46■□□□□ 0.71
SWSAP1Q6NVH7 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC19.46■□□□□ 0.71
SWSAP1Q6NVH7 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC19.46■□□□□ 0.71
SWSAP1Q6NVH7 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
SWSAP1Q6NVH7 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SWSAP1Q6NVH7 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
SWSAP1Q6NVH7 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
SWSAP1Q6NVH7 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC19.46■□□□□ 0.71
SWSAP1Q6NVH7 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SWSAP1Q6NVH7 ELK2BP-201ENST00000415014 1224 ntBASIC19.46■□□□□ 0.71
SWSAP1Q6NVH7 LINC00982-205ENST00000420957 435 ntBASIC19.46■□□□□ 0.71
SWSAP1Q6NVH7 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
SWSAP1Q6NVH7 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SWSAP1Q6NVH7 CALM1-205ENST00000553542 877 ntTSL 5 BASIC19.46■□□□□ 0.71
SWSAP1Q6NVH7 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC19.46■□□□□ 0.71
SWSAP1Q6NVH7 AL139424.1-201ENST00000607572 797 ntBASIC19.46■□□□□ 0.71
SWSAP1Q6NVH7 PGM5P2-202ENST00000637225 1043 ntBASIC19.46■□□□□ 0.71
SWSAP1Q6NVH7 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
SWSAP1Q6NVH7 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
SWSAP1Q6NVH7 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms