Protein–RNA interactions for Protein: Q6NUP7

PPP4R4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4Q6NUP7 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PPP4R4Q6NUP7 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PPP4R4Q6NUP7 AC009947.2-201ENST00000444014 672 ntBASIC16.84■□□□□ 0.29
PPP4R4Q6NUP7 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC16.84■□□□□ 0.29
PPP4R4Q6NUP7 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC16.84■□□□□ 0.29
PPP4R4Q6NUP7 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC16.84■□□□□ 0.29
PPP4R4Q6NUP7 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PPP4R4Q6NUP7 AC141257.4-201ENST00000634557 245 ntBASIC16.84■□□□□ 0.29
PPP4R4Q6NUP7 AC136944.6-201ENST00000634818 245 ntBASIC16.84■□□□□ 0.29
PPP4R4Q6NUP7 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.84■□□□□ 0.29
PPP4R4Q6NUP7 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PPP4R4Q6NUP7 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PPP4R4Q6NUP7 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
PPP4R4Q6NUP7 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC16.84■□□□□ 0.29
PPP4R4Q6NUP7 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC16.84■□□□□ 0.29
PPP4R4Q6NUP7 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PPP4R4Q6NUP7 KRT8P50-201ENST00000562022 1438 ntBASIC16.84■□□□□ 0.29
PPP4R4Q6NUP7 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
PPP4R4Q6NUP7 AC008894.3-201ENST00000624324 3103 ntBASIC16.84■□□□□ 0.29
PPP4R4Q6NUP7 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PPP4R4Q6NUP7 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PPP4R4Q6NUP7 OS9-205ENST00000413095 1660 ntTSL 2 BASIC16.84■□□□□ 0.29
PPP4R4Q6NUP7 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PPP4R4Q6NUP7 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PPP4R4Q6NUP7 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
PPP4R4Q6NUP7 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PPP4R4Q6NUP7 SDHAP2-201ENST00000455183 2001 ntBASIC16.84■□□□□ 0.29
PPP4R4Q6NUP7 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC16.84■□□□□ 0.29
PPP4R4Q6NUP7 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
PPP4R4Q6NUP7 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
PPP4R4Q6NUP7 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
PPP4R4Q6NUP7 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
PPP4R4Q6NUP7 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC16.83■□□□□ 0.29
PPP4R4Q6NUP7 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.29
PPP4R4Q6NUP7 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
PPP4R4Q6NUP7 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
PPP4R4Q6NUP7 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PPP4R4Q6NUP7 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC16.83■□□□□ 0.28
PPP4R4Q6NUP7 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PPP4R4Q6NUP7 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PPP4R4Q6NUP7 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PPP4R4Q6NUP7 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PPP4R4Q6NUP7 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC16.83■□□□□ 0.28
PPP4R4Q6NUP7 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
PPP4R4Q6NUP7 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PPP4R4Q6NUP7 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
PPP4R4Q6NUP7 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PPP4R4Q6NUP7 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PPP4R4Q6NUP7 ANKRD20A18P-201ENST00000359341 492 ntBASIC16.83■□□□□ 0.28
PPP4R4Q6NUP7 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PPP4R4Q6NUP7 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
PPP4R4Q6NUP7 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PPP4R4Q6NUP7 MIR564-202ENST00000385049 94 ntBASIC16.83■□□□□ 0.28
PPP4R4Q6NUP7 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PPP4R4Q6NUP7 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PPP4R4Q6NUP7 AL023284.2-201ENST00000405850 579 ntBASIC16.83■□□□□ 0.28
PPP4R4Q6NUP7 AK4P3-201ENST00000418260 669 ntBASIC16.83■□□□□ 0.28
PPP4R4Q6NUP7 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC16.83■□□□□ 0.28
PPP4R4Q6NUP7 AC092647.4-201ENST00000457211 535 ntBASIC16.83■□□□□ 0.28
PPP4R4Q6NUP7 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PPP4R4Q6NUP7 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PPP4R4Q6NUP7 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PPP4R4Q6NUP7 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
PPP4R4Q6NUP7 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PPP4R4Q6NUP7 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC16.83■□□□□ 0.28
PPP4R4Q6NUP7 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC16.83■□□□□ 0.28
PPP4R4Q6NUP7 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PPP4R4Q6NUP7 AC139887.4-201ENST00000607877 719 ntBASIC16.83■□□□□ 0.28
PPP4R4Q6NUP7 AC010331.1-201ENST00000611423 582 ntBASIC16.83■□□□□ 0.28
PPP4R4Q6NUP7 AL023973.1-201ENST00000624619 620 ntBASIC16.83■□□□□ 0.28
PPP4R4Q6NUP7 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC16.83■□□□□ 0.28
PPP4R4Q6NUP7 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
PPP4R4Q6NUP7 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC16.83■□□□□ 0.28
PPP4R4Q6NUP7 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PPP4R4Q6NUP7 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
PPP4R4Q6NUP7 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PPP4R4Q6NUP7 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC16.83■□□□□ 0.28
PPP4R4Q6NUP7 AL513477.1-201ENST00000602865 2407 ntBASIC16.82■□□□□ 0.28
PPP4R4Q6NUP7 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PPP4R4Q6NUP7 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PPP4R4Q6NUP7 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC16.82■□□□□ 0.28
PPP4R4Q6NUP7 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PPP4R4Q6NUP7 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PPP4R4Q6NUP7 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PPP4R4Q6NUP7 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PPP4R4Q6NUP7 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PPP4R4Q6NUP7 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PPP4R4Q6NUP7 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PPP4R4Q6NUP7 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PPP4R4Q6NUP7 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
PPP4R4Q6NUP7 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PPP4R4Q6NUP7 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC16.82■□□□□ 0.28
PPP4R4Q6NUP7 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PPP4R4Q6NUP7 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PPP4R4Q6NUP7 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
PPP4R4Q6NUP7 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC16.82■□□□□ 0.28
PPP4R4Q6NUP7 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PPP4R4Q6NUP7 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
PPP4R4Q6NUP7 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PPP4R4Q6NUP7 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms