Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LPCAT4Q643R3 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LPCAT4Q643R3 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LPCAT4Q643R3 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC16.55■□□□□ 0.24
LPCAT4Q643R3 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC16.55■□□□□ 0.24
LPCAT4Q643R3 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LPCAT4Q643R3 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC16.55■□□□□ 0.24
LPCAT4Q643R3 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC16.55■□□□□ 0.24
LPCAT4Q643R3 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LPCAT4Q643R3 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
LPCAT4Q643R3 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
LPCAT4Q643R3 LINC02012-201ENST00000608206 1725 ntBASIC16.55■□□□□ 0.24
LPCAT4Q643R3 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LPCAT4Q643R3 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LPCAT4Q643R3 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
LPCAT4Q643R3 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LPCAT4Q643R3 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LPCAT4Q643R3 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC16.55■□□□□ 0.24
LPCAT4Q643R3 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LPCAT4Q643R3 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC16.54■□□□□ 0.24
LPCAT4Q643R3 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LPCAT4Q643R3 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC16.54■□□□□ 0.24
LPCAT4Q643R3 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC16.54■□□□□ 0.24
LPCAT4Q643R3 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
LPCAT4Q643R3 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC16.54■□□□□ 0.24
LPCAT4Q643R3 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC16.54■□□□□ 0.24
LPCAT4Q643R3 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LPCAT4Q643R3 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC16.54■□□□□ 0.24
LPCAT4Q643R3 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
LPCAT4Q643R3 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
LPCAT4Q643R3 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LPCAT4Q643R3 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
LPCAT4Q643R3 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
LPCAT4Q643R3 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
LPCAT4Q643R3 BUB3-202ENST00000368859 667 ntTSL 3 BASIC16.54■□□□□ 0.24
LPCAT4Q643R3 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
LPCAT4Q643R3 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC16.54■□□□□ 0.24
LPCAT4Q643R3 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC16.54■□□□□ 0.24
LPCAT4Q643R3 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
LPCAT4Q643R3 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC16.54■□□□□ 0.24
LPCAT4Q643R3 RARRES2P10-201ENST00000564312 460 ntBASIC16.54■□□□□ 0.24
LPCAT4Q643R3 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC16.54■□□□□ 0.24
LPCAT4Q643R3 AC011298.2-201ENST00000617989 482 ntBASIC16.54■□□□□ 0.24
LPCAT4Q643R3 ABBA01031674.1-201ENST00000635145 728 ntBASIC16.54■□□□□ 0.24
LPCAT4Q643R3 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC16.54■□□□□ 0.24
LPCAT4Q643R3 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
LPCAT4Q643R3 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC16.54■□□□□ 0.24
LPCAT4Q643R3 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
LPCAT4Q643R3 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC16.53■□□□□ 0.24
LPCAT4Q643R3 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC16.53■□□□□ 0.24
LPCAT4Q643R3 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC16.53■□□□□ 0.24
LPCAT4Q643R3 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC16.53■□□□□ 0.24
LPCAT4Q643R3 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LPCAT4Q643R3 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LPCAT4Q643R3 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
LPCAT4Q643R3 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LPCAT4Q643R3 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LPCAT4Q643R3 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LPCAT4Q643R3 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC16.53■□□□□ 0.24
LPCAT4Q643R3 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC16.53■□□□□ 0.24
LPCAT4Q643R3 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LPCAT4Q643R3 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LPCAT4Q643R3 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
LPCAT4Q643R3 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
LPCAT4Q643R3 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC16.53■□□□□ 0.24
LPCAT4Q643R3 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC16.53■□□□□ 0.24
LPCAT4Q643R3 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
LPCAT4Q643R3 GUSBP6-202ENST00000438529 1198 ntBASIC16.53■□□□□ 0.24
LPCAT4Q643R3 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC16.53■□□□□ 0.24
LPCAT4Q643R3 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC16.53■□□□□ 0.24
LPCAT4Q643R3 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LPCAT4Q643R3 AC098934.4-201ENST00000564127 592 ntBASIC16.53■□□□□ 0.24
LPCAT4Q643R3 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC16.53■□□□□ 0.24
LPCAT4Q643R3 MIR3180-5-201ENST00000583743 153 ntBASIC16.53■□□□□ 0.24
LPCAT4Q643R3 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC16.53■□□□□ 0.24
LPCAT4Q643R3 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
LPCAT4Q643R3 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
LPCAT4Q643R3 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LPCAT4Q643R3 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LPCAT4Q643R3 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC16.53■□□□□ 0.24
LPCAT4Q643R3 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LPCAT4Q643R3 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC16.53■□□□□ 0.24
LPCAT4Q643R3 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC16.53■□□□□ 0.24
LPCAT4Q643R3 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
LPCAT4Q643R3 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
LPCAT4Q643R3 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
LPCAT4Q643R3 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LPCAT4Q643R3 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
LPCAT4Q643R3 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
LPCAT4Q643R3 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC16.53■□□□□ 0.24
LPCAT4Q643R3 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC16.53■□□□□ 0.24
LPCAT4Q643R3 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LPCAT4Q643R3 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LPCAT4Q643R3 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
LPCAT4Q643R3 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
LPCAT4Q643R3 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
LPCAT4Q643R3 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LPCAT4Q643R3 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
LPCAT4Q643R3 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
LPCAT4Q643R3 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms