Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC26.21■■□□□ 1.79
CDC42BPAQ5VT25 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC26.21■■□□□ 1.79
CDC42BPAQ5VT25 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC26.21■■□□□ 1.79
CDC42BPAQ5VT25 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC26.21■■□□□ 1.79
CDC42BPAQ5VT25 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
CDC42BPAQ5VT25 AKAP8P1-201ENST00000434743 1349 ntBASIC26.21■■□□□ 1.79
CDC42BPAQ5VT25 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
CDC42BPAQ5VT25 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
CDC42BPAQ5VT25 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC26.21■■□□□ 1.79
CDC42BPAQ5VT25 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
CDC42BPAQ5VT25 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC26.21■■□□□ 1.79
CDC42BPAQ5VT25 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC26.21■■□□□ 1.79
CDC42BPAQ5VT25 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
CDC42BPAQ5VT25 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
CDC42BPAQ5VT25 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC26.21■■□□□ 1.79
CDC42BPAQ5VT25 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
CDC42BPAQ5VT25 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
CDC42BPAQ5VT25 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC26.2■■□□□ 1.79
CDC42BPAQ5VT25 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
CDC42BPAQ5VT25 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
CDC42BPAQ5VT25 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
CDC42BPAQ5VT25 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
CDC42BPAQ5VT25 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC26.2■■□□□ 1.79
CDC42BPAQ5VT25 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
CDC42BPAQ5VT25 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC26.2■■□□□ 1.79
CDC42BPAQ5VT25 LINC01451-201ENST00000623792 534 ntBASIC26.2■■□□□ 1.79
CDC42BPAQ5VT25 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC26.2■■□□□ 1.78
CDC42BPAQ5VT25 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
CDC42BPAQ5VT25 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC26.2■■□□□ 1.78
CDC42BPAQ5VT25 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC26.2■■□□□ 1.78
CDC42BPAQ5VT25 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC26.2■■□□□ 1.78
CDC42BPAQ5VT25 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
CDC42BPAQ5VT25 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC26.2■■□□□ 1.78
CDC42BPAQ5VT25 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
CDC42BPAQ5VT25 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC26.2■■□□□ 1.78
CDC42BPAQ5VT25 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC26.19■■□□□ 1.78
CDC42BPAQ5VT25 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
CDC42BPAQ5VT25 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC26.19■■□□□ 1.78
CDC42BPAQ5VT25 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC26.19■■□□□ 1.78
CDC42BPAQ5VT25 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC26.19■■□□□ 1.78
CDC42BPAQ5VT25 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC26.19■■□□□ 1.78
CDC42BPAQ5VT25 TSFM-210ENST00000550559 897 ntTSL 5 BASIC26.19■■□□□ 1.78
CDC42BPAQ5VT25 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
CDC42BPAQ5VT25 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
CDC42BPAQ5VT25 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
CDC42BPAQ5VT25 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
CDC42BPAQ5VT25 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
CDC42BPAQ5VT25 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC26.19■■□□□ 1.78
CDC42BPAQ5VT25 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
CDC42BPAQ5VT25 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
CDC42BPAQ5VT25 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
CDC42BPAQ5VT25 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
CDC42BPAQ5VT25 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
CDC42BPAQ5VT25 WRB-204ENST00000398753 699 ntTSL 3 BASIC26.19■■□□□ 1.78
CDC42BPAQ5VT25 SPDYE14P-201ENST00000442619 822 ntBASIC26.19■■□□□ 1.78
CDC42BPAQ5VT25 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC26.19■■□□□ 1.78
CDC42BPAQ5VT25 CD7-202ENST00000578509 925 ntTSL 3 BASIC26.19■■□□□ 1.78
CDC42BPAQ5VT25 PRR29-209ENST00000582540 967 ntTSL 2 BASIC26.19■■□□□ 1.78
CDC42BPAQ5VT25 AC138761.1-201ENST00000584393 385 ntBASIC26.19■■□□□ 1.78
CDC42BPAQ5VT25 BSG-214ENST00000614867 960 ntTSL 3 BASIC26.19■■□□□ 1.78
CDC42BPAQ5VT25 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC26.19■■□□□ 1.78
CDC42BPAQ5VT25 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC26.19■■□□□ 1.78
CDC42BPAQ5VT25 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
CDC42BPAQ5VT25 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC26.19■■□□□ 1.78
CDC42BPAQ5VT25 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
CDC42BPAQ5VT25 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC26.19■■□□□ 1.78
CDC42BPAQ5VT25 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
CDC42BPAQ5VT25 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC26.18■■□□□ 1.78
CDC42BPAQ5VT25 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC26.18■■□□□ 1.78
CDC42BPAQ5VT25 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
CDC42BPAQ5VT25 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
CDC42BPAQ5VT25 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC26.18■■□□□ 1.78
CDC42BPAQ5VT25 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC26.18■■□□□ 1.78
CDC42BPAQ5VT25 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC26.18■■□□□ 1.78
CDC42BPAQ5VT25 AC069262.1-201ENST00000539058 672 ntBASIC26.18■■□□□ 1.78
CDC42BPAQ5VT25 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC26.18■■□□□ 1.78
CDC42BPAQ5VT25 DUX4L27-201ENST00000554796 1261 ntBASIC26.18■■□□□ 1.78
CDC42BPAQ5VT25 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC26.18■■□□□ 1.78
CDC42BPAQ5VT25 NAA60-208ENST00000570819 833 ntTSL 2 BASIC26.18■■□□□ 1.78
CDC42BPAQ5VT25 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
CDC42BPAQ5VT25 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC26.18■■□□□ 1.78
CDC42BPAQ5VT25 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC26.18■■□□□ 1.78
CDC42BPAQ5VT25 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC26.18■■□□□ 1.78
CDC42BPAQ5VT25 AC098818.2-201ENST00000564925 2320 ntBASIC26.18■■□□□ 1.78
CDC42BPAQ5VT25 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC26.18■■□□□ 1.78
CDC42BPAQ5VT25 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC26.18■■□□□ 1.78
CDC42BPAQ5VT25 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
CDC42BPAQ5VT25 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
CDC42BPAQ5VT25 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
CDC42BPAQ5VT25 CNN2P2-201ENST00000443536 909 ntBASIC26.17■■□□□ 1.78
CDC42BPAQ5VT25 CNN2P3-201ENST00000450201 906 ntBASIC26.17■■□□□ 1.78
CDC42BPAQ5VT25 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC26.17■■□□□ 1.78
CDC42BPAQ5VT25 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC26.17■■□□□ 1.78
CDC42BPAQ5VT25 AL136317.3-201ENST00000618497 906 ntBASIC26.17■■□□□ 1.78
CDC42BPAQ5VT25 HFE2-206ENST00000634927 506 ntTSL 4 BASIC26.17■■□□□ 1.78
CDC42BPAQ5VT25 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC26.17■■□□□ 1.78
CDC42BPAQ5VT25 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC26.17■■□□□ 1.78
CDC42BPAQ5VT25 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC26.17■■□□□ 1.78
CDC42BPAQ5VT25 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC26.17■■□□□ 1.78
CDC42BPAQ5VT25 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC26.17■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms