Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC18.52■□□□□ 0.56
VARS2Q5ST30 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
VARS2Q5ST30 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC18.52■□□□□ 0.56
VARS2Q5ST30 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
VARS2Q5ST30 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18.52■□□□□ 0.55
VARS2Q5ST30 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC18.52■□□□□ 0.55
VARS2Q5ST30 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
VARS2Q5ST30 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
VARS2Q5ST30 GPR89P-201ENST00000407924 1495 ntBASIC18.52■□□□□ 0.55
VARS2Q5ST30 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
VARS2Q5ST30 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
VARS2Q5ST30 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC18.51■□□□□ 0.55
VARS2Q5ST30 AMT-250ENST00000637682 1823 ntTSL 5 BASIC18.51■□□□□ 0.55
VARS2Q5ST30 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.51■□□□□ 0.55
VARS2Q5ST30 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
VARS2Q5ST30 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
VARS2Q5ST30 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
VARS2Q5ST30 PXK-206ENST00000463280 2825 ntTSL 2 BASIC18.51■□□□□ 0.55
VARS2Q5ST30 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
VARS2Q5ST30 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
VARS2Q5ST30 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
VARS2Q5ST30 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
VARS2Q5ST30 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.51■□□□□ 0.55
VARS2Q5ST30 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
VARS2Q5ST30 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
VARS2Q5ST30 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
VARS2Q5ST30 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
VARS2Q5ST30 CRYGEP-201ENST00000412192 528 ntBASIC18.51■□□□□ 0.55
VARS2Q5ST30 AC023274.1-201ENST00000418278 595 ntBASIC18.51■□□□□ 0.55
VARS2Q5ST30 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC18.51■□□□□ 0.55
VARS2Q5ST30 MIR4751-201ENST00000578027 74 ntBASIC18.51■□□□□ 0.55
VARS2Q5ST30 AC010327.4-202ENST00000591484 748 ntBASIC18.51■□□□□ 0.55
VARS2Q5ST30 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC18.51■□□□□ 0.55
VARS2Q5ST30 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
VARS2Q5ST30 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
VARS2Q5ST30 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
VARS2Q5ST30 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
VARS2Q5ST30 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
VARS2Q5ST30 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
VARS2Q5ST30 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
VARS2Q5ST30 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
VARS2Q5ST30 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC18.51■□□□□ 0.55
VARS2Q5ST30 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC18.51■□□□□ 0.55
VARS2Q5ST30 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.51■□□□□ 0.55
VARS2Q5ST30 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
VARS2Q5ST30 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC18.5■□□□□ 0.55
VARS2Q5ST30 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
VARS2Q5ST30 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
VARS2Q5ST30 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
VARS2Q5ST30 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
VARS2Q5ST30 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
VARS2Q5ST30 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
VARS2Q5ST30 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
VARS2Q5ST30 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
VARS2Q5ST30 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
VARS2Q5ST30 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC18.5■□□□□ 0.55
VARS2Q5ST30 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
VARS2Q5ST30 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
VARS2Q5ST30 PMP22-202ENST00000395936 816 ntTSL 3 BASIC18.5■□□□□ 0.55
VARS2Q5ST30 PTCHD3P3-201ENST00000403073 906 ntBASIC18.5■□□□□ 0.55
VARS2Q5ST30 UPF3AP3-201ENST00000420996 769 ntBASIC18.5■□□□□ 0.55
VARS2Q5ST30 VN2R19P-201ENST00000442399 1052 ntBASIC18.5■□□□□ 0.55
VARS2Q5ST30 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC18.5■□□□□ 0.55
VARS2Q5ST30 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
VARS2Q5ST30 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC18.5■□□□□ 0.55
VARS2Q5ST30 LINC01551-203ENST00000550266 455 ntTSL 3 BASIC18.5■□□□□ 0.55
VARS2Q5ST30 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC18.5■□□□□ 0.55
VARS2Q5ST30 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
VARS2Q5ST30 AC004790.2-201ENST00000623588 572 ntBASIC18.5■□□□□ 0.55
VARS2Q5ST30 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
VARS2Q5ST30 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
VARS2Q5ST30 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC18.5■□□□□ 0.55
VARS2Q5ST30 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
VARS2Q5ST30 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
VARS2Q5ST30 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
VARS2Q5ST30 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC18.5■□□□□ 0.55
VARS2Q5ST30 AL354751.1-201ENST00000412768 1863 ntBASIC18.5■□□□□ 0.55
VARS2Q5ST30 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
VARS2Q5ST30 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
VARS2Q5ST30 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
VARS2Q5ST30 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC18.49■□□□□ 0.55
VARS2Q5ST30 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
VARS2Q5ST30 AC004832.2-201ENST00000426397 482 ntBASIC18.49■□□□□ 0.55
VARS2Q5ST30 GPX1P2-201ENST00000429271 606 ntBASIC18.49■□□□□ 0.55
VARS2Q5ST30 AC012497.1-201ENST00000429392 575 ntBASIC18.49■□□□□ 0.55
VARS2Q5ST30 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC18.49■□□□□ 0.55
VARS2Q5ST30 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC18.49■□□□□ 0.55
VARS2Q5ST30 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC18.49■□□□□ 0.55
VARS2Q5ST30 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC18.49■□□□□ 0.55
VARS2Q5ST30 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC18.49■□□□□ 0.55
VARS2Q5ST30 AC002347.1-201ENST00000569543 541 ntBASIC18.49■□□□□ 0.55
VARS2Q5ST30 AP001160.2-201ENST00000596071 487 ntBASIC18.49■□□□□ 0.55
VARS2Q5ST30 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC18.49■□□□□ 0.55
VARS2Q5ST30 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC18.49■□□□□ 0.55
VARS2Q5ST30 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
VARS2Q5ST30 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
VARS2Q5ST30 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
VARS2Q5ST30 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
VARS2Q5ST30 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC18.49■□□□□ 0.55
VARS2Q5ST30 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms