Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LRRK2Q5S007 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC15.03■□□□□ -0
LRRK2Q5S007 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LRRK2Q5S007 HAUS4P1-201ENST00000406739 1145 ntBASIC15.03■□□□□ -0
LRRK2Q5S007 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC15.03■□□□□ -0
LRRK2Q5S007 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
LRRK2Q5S007 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC15.03■□□□□ -0
LRRK2Q5S007 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC15.03■□□□□ -0
LRRK2Q5S007 AFG3L1P-217ENST00000557444 2447 ntBASIC15.03■□□□□ -0
LRRK2Q5S007 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LRRK2Q5S007 HARS-201ENST00000307633 1780 ntTSL 2 BASIC15.03■□□□□ -0
LRRK2Q5S007 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LRRK2Q5S007 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC15.03■□□□□ -0
LRRK2Q5S007 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LRRK2Q5S007 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
LRRK2Q5S007 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC15.03■□□□□ -0
LRRK2Q5S007 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC15.03■□□□□ -0
LRRK2Q5S007 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LRRK2Q5S007 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
LRRK2Q5S007 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC15.03■□□□□ -0
LRRK2Q5S007 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC15.03■□□□□ -0
LRRK2Q5S007 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC15.03■□□□□ -0
LRRK2Q5S007 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LRRK2Q5S007 MXI1-205ENST00000393134 889 ntTSL 2 BASIC15.03■□□□□ -0
LRRK2Q5S007 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
LRRK2Q5S007 ACTBP11-201ENST00000436287 1126 ntBASIC15.03■□□□□ -0
LRRK2Q5S007 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC15.03■□□□□ -0
LRRK2Q5S007 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
LRRK2Q5S007 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC15.03■□□□□ -0
LRRK2Q5S007 AC009407.1-201ENST00000568958 598 ntBASIC15.03■□□□□ -0
LRRK2Q5S007 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC15.03■□□□□ -0
LRRK2Q5S007 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LRRK2Q5S007 GMCL1P1-201ENST00000463439 1581 ntBASIC15.03■□□□□ -0
LRRK2Q5S007 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC15.03■□□□□ -0
LRRK2Q5S007 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC15.03■□□□□ -0
LRRK2Q5S007 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
LRRK2Q5S007 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
LRRK2Q5S007 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
LRRK2Q5S007 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
LRRK2Q5S007 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC15.02■□□□□ -0
LRRK2Q5S007 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC15.02■□□□□ -0
LRRK2Q5S007 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
LRRK2Q5S007 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
LRRK2Q5S007 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
LRRK2Q5S007 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
LRRK2Q5S007 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC15.02■□□□□ -0
LRRK2Q5S007 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC15.02■□□□□ -0
LRRK2Q5S007 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC15.02■□□□□ -0
LRRK2Q5S007 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC15.02■□□□□ -0
LRRK2Q5S007 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC15.02■□□□□ -0
LRRK2Q5S007 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
LRRK2Q5S007 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC15.02■□□□□ -0
LRRK2Q5S007 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC15.02■□□□□ -0
LRRK2Q5S007 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC15.02■□□□□ -0
LRRK2Q5S007 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC15.02■□□□□ -0
LRRK2Q5S007 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
LRRK2Q5S007 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC15.02■□□□□ -0
LRRK2Q5S007 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC15.02■□□□□ -0
LRRK2Q5S007 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC15.02■□□□□ -0
LRRK2Q5S007 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
LRRK2Q5S007 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
LRRK2Q5S007 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC15.02□□□□□ -0.01
LRRK2Q5S007 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
LRRK2Q5S007 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
LRRK2Q5S007 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
LRRK2Q5S007 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
LRRK2Q5S007 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
LRRK2Q5S007 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
LRRK2Q5S007 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
LRRK2Q5S007 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
LRRK2Q5S007 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC15.02□□□□□ -0.01
LRRK2Q5S007 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
LRRK2Q5S007 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
LRRK2Q5S007 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC15.02□□□□□ -0.01
LRRK2Q5S007 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC15.02□□□□□ -0.01
LRRK2Q5S007 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC15.02□□□□□ -0.01
LRRK2Q5S007 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC15.02□□□□□ -0.01
LRRK2Q5S007 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
LRRK2Q5S007 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
LRRK2Q5S007 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC15.02□□□□□ -0.01
LRRK2Q5S007 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LRRK2Q5S007 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LRRK2Q5S007 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC15.01□□□□□ -0.01
LRRK2Q5S007 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
LRRK2Q5S007 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
LRRK2Q5S007 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC15.01□□□□□ -0.01
LRRK2Q5S007 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC15.01□□□□□ -0.01
LRRK2Q5S007 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
LRRK2Q5S007 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LRRK2Q5S007 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
LRRK2Q5S007 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
LRRK2Q5S007 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
LRRK2Q5S007 AC112492.5-201ENST00000421897 457 ntBASIC15.01□□□□□ -0.01
LRRK2Q5S007 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC15.01□□□□□ -0.01
LRRK2Q5S007 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC15.01□□□□□ -0.01
LRRK2Q5S007 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC15.01□□□□□ -0.01
LRRK2Q5S007 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC15.01□□□□□ -0.01
LRRK2Q5S007 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC15.01□□□□□ -0.01
LRRK2Q5S007 CD74-212ENST00000524315 584 ntTSL 5 BASIC15.01□□□□□ -0.01
LRRK2Q5S007 AC107918.2-201ENST00000530817 355 ntBASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms