Protein–RNA interactions for Protein: Q2Q1W2

TRIM71, E3 ubiquitin-protein ligase TRIM71, humanhuman

Known RBP Predictions only

Length 868 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM71Q2Q1W2 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
TRIM71Q2Q1W2 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRIM71Q2Q1W2 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC19■□□□□ 0.63
TRIM71Q2Q1W2 AC092919.2-201ENST00000623631 1645 ntBASIC19■□□□□ 0.63
TRIM71Q2Q1W2 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC19■□□□□ 0.63
TRIM71Q2Q1W2 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC19■□□□□ 0.63
TRIM71Q2Q1W2 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC19■□□□□ 0.63
TRIM71Q2Q1W2 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRIM71Q2Q1W2 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRIM71Q2Q1W2 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRIM71Q2Q1W2 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC19■□□□□ 0.63
TRIM71Q2Q1W2 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC19■□□□□ 0.63
TRIM71Q2Q1W2 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
TRIM71Q2Q1W2 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC19■□□□□ 0.63
TRIM71Q2Q1W2 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC19■□□□□ 0.63
TRIM71Q2Q1W2 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
TRIM71Q2Q1W2 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC19■□□□□ 0.63
TRIM71Q2Q1W2 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRIM71Q2Q1W2 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC19■□□□□ 0.63
TRIM71Q2Q1W2 AC093503.3-201ENST00000624917 2352 ntBASIC19■□□□□ 0.63
TRIM71Q2Q1W2 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
TRIM71Q2Q1W2 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC19■□□□□ 0.63
TRIM71Q2Q1W2 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRIM71Q2Q1W2 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
TRIM71Q2Q1W2 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC19■□□□□ 0.63
TRIM71Q2Q1W2 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC19■□□□□ 0.63
TRIM71Q2Q1W2 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC19■□□□□ 0.63
TRIM71Q2Q1W2 AL121761.2-201ENST00000598007 1648 ntBASIC19■□□□□ 0.63
TRIM71Q2Q1W2 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
TRIM71Q2Q1W2 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRIM71Q2Q1W2 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
TRIM71Q2Q1W2 AC006116.8-202ENST00000587620 1550 ntBASIC18.99■□□□□ 0.63
TRIM71Q2Q1W2 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRIM71Q2Q1W2 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRIM71Q2Q1W2 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRIM71Q2Q1W2 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TRIM71Q2Q1W2 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRIM71Q2Q1W2 NEK7-201ENST00000367383 586 ntTSL 2 BASIC18.99■□□□□ 0.63
TRIM71Q2Q1W2 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRIM71Q2Q1W2 DDT-204ENST00000404092 805 ntTSL 3 BASIC18.99■□□□□ 0.63
TRIM71Q2Q1W2 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
TRIM71Q2Q1W2 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC18.99■□□□□ 0.63
TRIM71Q2Q1W2 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRIM71Q2Q1W2 SLC25A6P2-201ENST00000497974 877 ntBASIC18.99■□□□□ 0.63
TRIM71Q2Q1W2 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC18.99■□□□□ 0.63
TRIM71Q2Q1W2 RPL28-205ENST00000558131 444 ntTSL 5 BASIC18.99■□□□□ 0.63
TRIM71Q2Q1W2 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC18.99■□□□□ 0.63
TRIM71Q2Q1W2 REXO1L3P-201ENST00000622202 1288 ntBASIC18.99■□□□□ 0.63
TRIM71Q2Q1W2 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC18.99■□□□□ 0.63
TRIM71Q2Q1W2 REXO1L11P-201ENST00000620964 1927 ntBASIC18.99■□□□□ 0.63
TRIM71Q2Q1W2 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRIM71Q2Q1W2 AL138781.2-201ENST00000617896 1843 ntBASIC18.99■□□□□ 0.63
TRIM71Q2Q1W2 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRIM71Q2Q1W2 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC18.99■□□□□ 0.63
TRIM71Q2Q1W2 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TRIM71Q2Q1W2 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRIM71Q2Q1W2 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC18.99■□□□□ 0.63
TRIM71Q2Q1W2 FLJ13224-201ENST00000313737 1514 ntBASIC18.99■□□□□ 0.63
TRIM71Q2Q1W2 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC18.99■□□□□ 0.63
TRIM71Q2Q1W2 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
TRIM71Q2Q1W2 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRIM71Q2Q1W2 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRIM71Q2Q1W2 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRIM71Q2Q1W2 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
TRIM71Q2Q1W2 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC18.98■□□□□ 0.63
TRIM71Q2Q1W2 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TRIM71Q2Q1W2 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC18.98■□□□□ 0.63
TRIM71Q2Q1W2 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRIM71Q2Q1W2 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC18.98■□□□□ 0.63
TRIM71Q2Q1W2 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TRIM71Q2Q1W2 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRIM71Q2Q1W2 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRIM71Q2Q1W2 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
TRIM71Q2Q1W2 MIR770-201ENST00000390219 98 ntBASIC18.98■□□□□ 0.63
TRIM71Q2Q1W2 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC18.98■□□□□ 0.63
TRIM71Q2Q1W2 ADH5P3-201ENST00000433842 1137 ntBASIC18.98■□□□□ 0.63
TRIM71Q2Q1W2 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TRIM71Q2Q1W2 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC18.98■□□□□ 0.63
TRIM71Q2Q1W2 AC022145.2-201ENST00000598203 171 ntBASIC18.98■□□□□ 0.63
TRIM71Q2Q1W2 AC004835.2-201ENST00000603762 682 ntBASIC18.98■□□□□ 0.63
TRIM71Q2Q1W2 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC18.98■□□□□ 0.63
TRIM71Q2Q1W2 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC18.98■□□□□ 0.63
TRIM71Q2Q1W2 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC18.98■□□□□ 0.63
TRIM71Q2Q1W2 BX323043.1-201ENST00000641006 1765 ntBASIC18.98■□□□□ 0.63
TRIM71Q2Q1W2 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRIM71Q2Q1W2 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC18.97■□□□□ 0.63
TRIM71Q2Q1W2 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
TRIM71Q2Q1W2 AC046185.3-201ENST00000623228 1824 ntBASIC18.97■□□□□ 0.63
TRIM71Q2Q1W2 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRIM71Q2Q1W2 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
TRIM71Q2Q1W2 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TRIM71Q2Q1W2 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRIM71Q2Q1W2 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRIM71Q2Q1W2 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC18.97■□□□□ 0.63
TRIM71Q2Q1W2 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC18.97■□□□□ 0.63
TRIM71Q2Q1W2 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
TRIM71Q2Q1W2 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRIM71Q2Q1W2 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC18.97■□□□□ 0.63
TRIM71Q2Q1W2 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
TRIM71Q2Q1W2 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms