Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 AL049757.1-201ENST00000616842 1596 ntBASIC16.87■□□□□ 0.29
RSPO4Q2I0M5 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RSPO4Q2I0M5 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RSPO4Q2I0M5 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RSPO4Q2I0M5 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
RSPO4Q2I0M5 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC16.87■□□□□ 0.29
RSPO4Q2I0M5 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RSPO4Q2I0M5 MRPS18AP1-201ENST00000414458 589 ntBASIC16.87■□□□□ 0.29
RSPO4Q2I0M5 AC241585.1-201ENST00000433527 519 ntBASIC16.87■□□□□ 0.29
RSPO4Q2I0M5 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC16.87■□□□□ 0.29
RSPO4Q2I0M5 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC16.87■□□□□ 0.29
RSPO4Q2I0M5 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC16.87■□□□□ 0.29
RSPO4Q2I0M5 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC16.87■□□□□ 0.29
RSPO4Q2I0M5 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC16.87■□□□□ 0.29
RSPO4Q2I0M5 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC16.87■□□□□ 0.29
RSPO4Q2I0M5 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
RSPO4Q2I0M5 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RSPO4Q2I0M5 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RSPO4Q2I0M5 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
RSPO4Q2I0M5 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC16.87■□□□□ 0.29
RSPO4Q2I0M5 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RSPO4Q2I0M5 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
RSPO4Q2I0M5 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RSPO4Q2I0M5 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RSPO4Q2I0M5 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RSPO4Q2I0M5 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RSPO4Q2I0M5 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RSPO4Q2I0M5 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RSPO4Q2I0M5 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC16.86■□□□□ 0.29
RSPO4Q2I0M5 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RSPO4Q2I0M5 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RSPO4Q2I0M5 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC16.86■□□□□ 0.29
RSPO4Q2I0M5 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
RSPO4Q2I0M5 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
RSPO4Q2I0M5 PGF-202ENST00000405431 666 ntTSL 5 BASIC16.86■□□□□ 0.29
RSPO4Q2I0M5 AC092580.3-201ENST00000430932 139 ntBASIC16.86■□□□□ 0.29
RSPO4Q2I0M5 AC092658.1-201ENST00000505836 891 ntBASIC16.86■□□□□ 0.29
RSPO4Q2I0M5 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC16.86■□□□□ 0.29
RSPO4Q2I0M5 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC16.86■□□□□ 0.29
RSPO4Q2I0M5 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC16.86■□□□□ 0.29
RSPO4Q2I0M5 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
RSPO4Q2I0M5 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC16.86■□□□□ 0.29
RSPO4Q2I0M5 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC16.86■□□□□ 0.29
RSPO4Q2I0M5 NAA38-206ENST00000576384 424 ntTSL 2 BASIC16.86■□□□□ 0.29
RSPO4Q2I0M5 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC16.86■□□□□ 0.29
RSPO4Q2I0M5 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
RSPO4Q2I0M5 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC16.86■□□□□ 0.29
RSPO4Q2I0M5 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
RSPO4Q2I0M5 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
RSPO4Q2I0M5 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
RSPO4Q2I0M5 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RSPO4Q2I0M5 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RSPO4Q2I0M5 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RSPO4Q2I0M5 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC16.85■□□□□ 0.29
RSPO4Q2I0M5 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC16.85■□□□□ 0.29
RSPO4Q2I0M5 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC16.85■□□□□ 0.29
RSPO4Q2I0M5 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RSPO4Q2I0M5 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RSPO4Q2I0M5 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RSPO4Q2I0M5 CALY-202ENST00000368555 783 ntTSL 2 BASIC16.85■□□□□ 0.29
RSPO4Q2I0M5 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC16.85■□□□□ 0.29
RSPO4Q2I0M5 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC16.85■□□□□ 0.29
RSPO4Q2I0M5 SPDYE14P-201ENST00000442619 822 ntBASIC16.85■□□□□ 0.29
RSPO4Q2I0M5 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RSPO4Q2I0M5 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC16.85■□□□□ 0.29
RSPO4Q2I0M5 PPP6R2P1-201ENST00000450880 1275 ntBASIC16.85■□□□□ 0.29
RSPO4Q2I0M5 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC16.85■□□□□ 0.29
RSPO4Q2I0M5 IGHV3-62-201ENST00000520057 340 ntBASIC16.85■□□□□ 0.29
RSPO4Q2I0M5 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC16.85■□□□□ 0.29
RSPO4Q2I0M5 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC16.85■□□□□ 0.29
RSPO4Q2I0M5 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RSPO4Q2I0M5 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC16.85■□□□□ 0.29
RSPO4Q2I0M5 AL135744.1-201ENST00000565098 629 ntBASIC16.85■□□□□ 0.29
RSPO4Q2I0M5 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC16.85■□□□□ 0.29
RSPO4Q2I0M5 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC16.85■□□□□ 0.29
RSPO4Q2I0M5 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
RSPO4Q2I0M5 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC16.85■□□□□ 0.29
RSPO4Q2I0M5 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
RSPO4Q2I0M5 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC16.85■□□□□ 0.29
RSPO4Q2I0M5 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC16.85■□□□□ 0.29
RSPO4Q2I0M5 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC16.85■□□□□ 0.29
RSPO4Q2I0M5 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC16.85■□□□□ 0.29
RSPO4Q2I0M5 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RSPO4Q2I0M5 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
RSPO4Q2I0M5 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
RSPO4Q2I0M5 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
RSPO4Q2I0M5 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RSPO4Q2I0M5 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC16.84■□□□□ 0.29
RSPO4Q2I0M5 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
RSPO4Q2I0M5 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
RSPO4Q2I0M5 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC16.84■□□□□ 0.29
RSPO4Q2I0M5 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC16.84■□□□□ 0.29
RSPO4Q2I0M5 GIMAP3P-201ENST00000495150 836 ntBASIC16.84■□□□□ 0.29
RSPO4Q2I0M5 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RSPO4Q2I0M5 ARL16-202ENST00000570561 768 ntTSL 2 BASIC16.84■□□□□ 0.29
RSPO4Q2I0M5 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC16.84■□□□□ 0.29
RSPO4Q2I0M5 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RSPO4Q2I0M5 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RSPO4Q2I0M5 ACTL9-202ENST00000612068 1252 ntBASIC16.84■□□□□ 0.29
RSPO4Q2I0M5 MIR6805-201ENST00000615055 62 ntBASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms