Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC14.85□□□□□ -0.03
SSBP1Q04837 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SSBP1Q04837 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC14.85□□□□□ -0.03
SSBP1Q04837 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC14.85□□□□□ -0.03
SSBP1Q04837 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SSBP1Q04837 SRI-203ENST00000419179 1307 ntTSL 2 BASIC14.85□□□□□ -0.03
SSBP1Q04837 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
SSBP1Q04837 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
SSBP1Q04837 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SSBP1Q04837 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SSBP1Q04837 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC14.85□□□□□ -0.03
SSBP1Q04837 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC14.85□□□□□ -0.03
SSBP1Q04837 FER1L4-210ENST00000615531 5998 ntBASIC14.85□□□□□ -0.03
SSBP1Q04837 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SSBP1Q04837 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SSBP1Q04837 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
SSBP1Q04837 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC14.84□□□□□ -0.03
SSBP1Q04837 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
SSBP1Q04837 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
SSBP1Q04837 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
SSBP1Q04837 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC14.84□□□□□ -0.03
SSBP1Q04837 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
SSBP1Q04837 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SSBP1Q04837 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SSBP1Q04837 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SSBP1Q04837 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
SSBP1Q04837 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
SSBP1Q04837 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SSBP1Q04837 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SSBP1Q04837 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SSBP1Q04837 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
SSBP1Q04837 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SSBP1Q04837 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
SSBP1Q04837 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
SSBP1Q04837 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SSBP1Q04837 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC14.84□□□□□ -0.03
SSBP1Q04837 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
SSBP1Q04837 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC14.84□□□□□ -0.03
SSBP1Q04837 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC14.84□□□□□ -0.03
SSBP1Q04837 AL353719.1-201ENST00000566847 864 ntBASIC14.84□□□□□ -0.03
SSBP1Q04837 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC14.84□□□□□ -0.03
SSBP1Q04837 GRAMD4P8-201ENST00000605465 1115 ntBASIC14.84□□□□□ -0.03
SSBP1Q04837 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
SSBP1Q04837 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SSBP1Q04837 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
SSBP1Q04837 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SSBP1Q04837 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
SSBP1Q04837 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SSBP1Q04837 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC14.84□□□□□ -0.03
SSBP1Q04837 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SSBP1Q04837 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
SSBP1Q04837 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC14.84□□□□□ -0.03
SSBP1Q04837 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
SSBP1Q04837 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SSBP1Q04837 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC14.84□□□□□ -0.03
SSBP1Q04837 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SSBP1Q04837 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC14.84□□□□□ -0.03
SSBP1Q04837 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
SSBP1Q04837 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
SSBP1Q04837 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC14.83□□□□□ -0.03
SSBP1Q04837 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
SSBP1Q04837 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.03
SSBP1Q04837 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
SSBP1Q04837 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
SSBP1Q04837 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.03
SSBP1Q04837 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
SSBP1Q04837 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
SSBP1Q04837 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
SSBP1Q04837 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SSBP1Q04837 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SSBP1Q04837 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
SSBP1Q04837 AGK-211ENST00000629555 2765 ntTSL 5 BASIC14.83□□□□□ -0.04
SSBP1Q04837 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC14.83□□□□□ -0.04
SSBP1Q04837 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SSBP1Q04837 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SSBP1Q04837 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC14.83□□□□□ -0.04
SSBP1Q04837 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SSBP1Q04837 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC14.83□□□□□ -0.04
SSBP1Q04837 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC14.83□□□□□ -0.04
SSBP1Q04837 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SSBP1Q04837 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
SSBP1Q04837 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
SSBP1Q04837 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC14.83□□□□□ -0.04
SSBP1Q04837 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SSBP1Q04837 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC14.83□□□□□ -0.04
SSBP1Q04837 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SSBP1Q04837 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC14.83□□□□□ -0.04
SSBP1Q04837 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SSBP1Q04837 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC14.83□□□□□ -0.04
SSBP1Q04837 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC14.83□□□□□ -0.04
SSBP1Q04837 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC14.83□□□□□ -0.04
SSBP1Q04837 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.04
SSBP1Q04837 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
SSBP1Q04837 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SSBP1Q04837 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC14.83□□□□□ -0.04
SSBP1Q04837 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
SSBP1Q04837 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC14.83□□□□□ -0.04
SSBP1Q04837 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
SSBP1Q04837 RNF216P1-203ENST00000404404 2427 ntBASIC14.83□□□□□ -0.04
SSBP1Q04837 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms