Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CX3CL1P78423 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
CX3CL1P78423 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC14.16□□□□□ -0.14
CX3CL1P78423 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CX3CL1P78423 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
CX3CL1P78423 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CX3CL1P78423 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC14.16□□□□□ -0.14
CX3CL1P78423 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CX3CL1P78423 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CX3CL1P78423 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CX3CL1P78423 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CX3CL1P78423 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
CX3CL1P78423 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CX3CL1P78423 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CX3CL1P78423 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CX3CL1P78423 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CX3CL1P78423 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC14.16□□□□□ -0.14
CX3CL1P78423 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CX3CL1P78423 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CX3CL1P78423 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC14.16□□□□□ -0.14
CX3CL1P78423 CHCHD2P8-201ENST00000429873 447 ntBASIC14.16□□□□□ -0.14
CX3CL1P78423 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CX3CL1P78423 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC14.16□□□□□ -0.14
CX3CL1P78423 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CX3CL1P78423 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
CX3CL1P78423 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC14.16□□□□□ -0.14
CX3CL1P78423 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CX3CL1P78423 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CX3CL1P78423 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC14.16□□□□□ -0.14
CX3CL1P78423 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CX3CL1P78423 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CX3CL1P78423 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CX3CL1P78423 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC14.16□□□□□ -0.14
CX3CL1P78423 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CX3CL1P78423 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CX3CL1P78423 AC006116.8-202ENST00000587620 1550 ntBASIC14.16□□□□□ -0.14
CX3CL1P78423 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC14.16□□□□□ -0.14
CX3CL1P78423 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CX3CL1P78423 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC14.16□□□□□ -0.14
CX3CL1P78423 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CX3CL1P78423 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC14.16□□□□□ -0.14
CX3CL1P78423 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC14.16□□□□□ -0.14
CX3CL1P78423 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
CX3CL1P78423 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CX3CL1P78423 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CX3CL1P78423 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
CX3CL1P78423 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CX3CL1P78423 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
CX3CL1P78423 FER1L4-210ENST00000615531 5998 ntBASIC14.16□□□□□ -0.14
CX3CL1P78423 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
CX3CL1P78423 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC14.16□□□□□ -0.14
CX3CL1P78423 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
CX3CL1P78423 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CX3CL1P78423 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
CX3CL1P78423 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC14.15□□□□□ -0.14
CX3CL1P78423 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC14.15□□□□□ -0.14
CX3CL1P78423 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CX3CL1P78423 AC009949.1-201ENST00000623048 1830 ntBASIC14.15□□□□□ -0.14
CX3CL1P78423 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
CX3CL1P78423 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CX3CL1P78423 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CX3CL1P78423 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
CX3CL1P78423 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CX3CL1P78423 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CX3CL1P78423 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CX3CL1P78423 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CX3CL1P78423 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CX3CL1P78423 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CX3CL1P78423 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
CX3CL1P78423 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
CX3CL1P78423 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CX3CL1P78423 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CX3CL1P78423 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CX3CL1P78423 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CX3CL1P78423 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CX3CL1P78423 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
CX3CL1P78423 TSSC2-201ENST00000450217 709 ntBASIC14.15□□□□□ -0.14
CX3CL1P78423 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC14.15□□□□□ -0.14
CX3CL1P78423 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CX3CL1P78423 AC011840.4-201ENST00000578471 627 ntBASIC14.15□□□□□ -0.14
CX3CL1P78423 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
CX3CL1P78423 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC14.15□□□□□ -0.14
CX3CL1P78423 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CX3CL1P78423 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CX3CL1P78423 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CX3CL1P78423 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CX3CL1P78423 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
CX3CL1P78423 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
CX3CL1P78423 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC14.15□□□□□ -0.14
CX3CL1P78423 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CX3CL1P78423 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CX3CL1P78423 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CX3CL1P78423 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC14.15□□□□□ -0.14
CX3CL1P78423 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
CX3CL1P78423 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CX3CL1P78423 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CX3CL1P78423 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CX3CL1P78423 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CX3CL1P78423 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
CX3CL1P78423 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms