Protein–RNA interactions for Protein: P63208

SKP1, S-phase kinase-associated protein 1, humanhuman

Predictions only

Length 163 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1P63208 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SKP1P63208 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC16.66■□□□□ 0.26
SKP1P63208 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
SKP1P63208 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SKP1P63208 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
SKP1P63208 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
SKP1P63208 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SKP1P63208 KLF4P1-201ENST00000412782 1185 ntBASIC16.66■□□□□ 0.26
SKP1P63208 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SKP1P63208 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SKP1P63208 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SKP1P63208 RBSN-204ENST00000449050 903 ntTSL 2 BASIC16.66■□□□□ 0.26
SKP1P63208 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SKP1P63208 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SKP1P63208 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SKP1P63208 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC16.66■□□□□ 0.26
SKP1P63208 AC109462.3-201ENST00000573934 613 ntBASIC16.66■□□□□ 0.26
SKP1P63208 AD001527.2-201ENST00000622994 785 ntBASIC16.66■□□□□ 0.26
SKP1P63208 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC16.66■□□□□ 0.26
SKP1P63208 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
SKP1P63208 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC16.66■□□□□ 0.26
SKP1P63208 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SKP1P63208 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
SKP1P63208 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
SKP1P63208 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
SKP1P63208 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
SKP1P63208 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
SKP1P63208 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC16.66■□□□□ 0.26
SKP1P63208 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
SKP1P63208 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
SKP1P63208 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
SKP1P63208 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC16.65■□□□□ 0.26
SKP1P63208 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC16.65■□□□□ 0.26
SKP1P63208 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
SKP1P63208 LSM5-204ENST00000409909 740 ntTSL 2 BASIC16.65■□□□□ 0.26
SKP1P63208 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC16.65■□□□□ 0.26
SKP1P63208 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC16.65■□□□□ 0.26
SKP1P63208 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SKP1P63208 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
SKP1P63208 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SKP1P63208 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC16.65■□□□□ 0.26
SKP1P63208 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC16.65■□□□□ 0.26
SKP1P63208 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SKP1P63208 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC16.65■□□□□ 0.26
SKP1P63208 AL139288.1-201ENST00000623748 933 ntBASIC16.65■□□□□ 0.26
SKP1P63208 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SKP1P63208 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC16.65■□□□□ 0.26
SKP1P63208 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SKP1P63208 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
SKP1P63208 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SKP1P63208 AC133963.1-201ENST00000504166 1679 ntBASIC16.65■□□□□ 0.26
SKP1P63208 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SKP1P63208 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC16.65■□□□□ 0.26
SKP1P63208 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC16.65■□□□□ 0.26
SKP1P63208 FUT8-AS1-201ENST00000621019 1521 ntBASIC16.65■□□□□ 0.26
SKP1P63208 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SKP1P63208 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC16.65■□□□□ 0.26
SKP1P63208 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC16.65■□□□□ 0.26
SKP1P63208 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
SKP1P63208 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC16.64■□□□□ 0.26
SKP1P63208 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
SKP1P63208 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.26
SKP1P63208 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.26
SKP1P63208 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SKP1P63208 AL049757.1-201ENST00000616842 1596 ntBASIC16.64■□□□□ 0.25
SKP1P63208 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SKP1P63208 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SKP1P63208 SIRPAP1-201ENST00000448467 1770 ntBASIC16.64■□□□□ 0.25
SKP1P63208 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SKP1P63208 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
SKP1P63208 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC16.64■□□□□ 0.25
SKP1P63208 AP005117.1-201ENST00000584346 1413 ntBASIC16.64■□□□□ 0.25
SKP1P63208 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
SKP1P63208 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
SKP1P63208 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
SKP1P63208 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SKP1P63208 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SKP1P63208 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SKP1P63208 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
SKP1P63208 MED16-201ENST00000269814 1199 ntTSL 5 BASIC16.64■□□□□ 0.25
SKP1P63208 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
SKP1P63208 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SKP1P63208 TLE1-202ENST00000376484 666 ntTSL 3 BASIC16.64■□□□□ 0.25
SKP1P63208 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC16.64■□□□□ 0.25
SKP1P63208 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SKP1P63208 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC16.64■□□□□ 0.25
SKP1P63208 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC16.64■□□□□ 0.25
SKP1P63208 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC16.64■□□□□ 0.25
SKP1P63208 BMF-207ENST00000559701 630 ntTSL 3 BASIC16.64■□□□□ 0.25
SKP1P63208 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC16.64■□□□□ 0.25
SKP1P63208 AC008608.2-201ENST00000606089 416 ntBASIC16.64■□□□□ 0.25
SKP1P63208 AC019129.2-201ENST00000609837 1235 ntBASIC16.64■□□□□ 0.25
SKP1P63208 AC073592.5-201ENST00000624854 528 ntBASIC16.64■□□□□ 0.25
SKP1P63208 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC16.64■□□□□ 0.25
SKP1P63208 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SKP1P63208 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
SKP1P63208 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SKP1P63208 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC16.64■□□□□ 0.25
SKP1P63208 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
SKP1P63208 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms