Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC15.68■□□□□ 0.1
CLRN1P58418 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC15.68■□□□□ 0.1
CLRN1P58418 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLRN1P58418 ARMC10P1-201ENST00000313754 855 ntBASIC15.68■□□□□ 0.1
CLRN1P58418 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
CLRN1P58418 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLRN1P58418 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC15.68■□□□□ 0.1
CLRN1P58418 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
CLRN1P58418 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLRN1P58418 COX5BP2-201ENST00000392354 334 ntBASIC15.68■□□□□ 0.1
CLRN1P58418 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CLRN1P58418 ISCU-203ENST00000431221 799 ntTSL 2 BASIC15.68■□□□□ 0.1
CLRN1P58418 AC246785.2-201ENST00000432512 513 ntBASIC15.68■□□□□ 0.1
CLRN1P58418 AC007967.3-201ENST00000434308 558 ntBASIC15.68■□□□□ 0.1
CLRN1P58418 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC15.68■□□□□ 0.1
CLRN1P58418 KRT18P35-201ENST00000510488 1269 ntBASIC15.68■□□□□ 0.1
CLRN1P58418 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CLRN1P58418 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLRN1P58418 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC15.68■□□□□ 0.1
CLRN1P58418 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLRN1P58418 AP000550.4-202ENST00000639755 178 ntBASIC15.68■□□□□ 0.1
CLRN1P58418 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLRN1P58418 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
CLRN1P58418 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLRN1P58418 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC15.68■□□□□ 0.1
CLRN1P58418 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLRN1P58418 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
CLRN1P58418 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
CLRN1P58418 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
CLRN1P58418 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
CLRN1P58418 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLRN1P58418 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC15.68■□□□□ 0.1
CLRN1P58418 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLRN1P58418 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC15.68■□□□□ 0.1
CLRN1P58418 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
CLRN1P58418 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC15.68■□□□□ 0.1
CLRN1P58418 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CLRN1P58418 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLRN1P58418 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CLRN1P58418 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CLRN1P58418 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC15.67■□□□□ 0.1
CLRN1P58418 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
CLRN1P58418 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CLRN1P58418 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CLRN1P58418 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CLRN1P58418 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CLRN1P58418 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CLRN1P58418 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CLRN1P58418 AC005104.2-201ENST00000427818 678 ntBASIC15.67■□□□□ 0.1
CLRN1P58418 ABR-204ENST00000543210 1049 ntTSL 2 BASIC15.67■□□□□ 0.1
CLRN1P58418 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CLRN1P58418 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC15.67■□□□□ 0.1
CLRN1P58418 ABR-217ENST00000572441 563 ntTSL 4 BASIC15.67■□□□□ 0.1
CLRN1P58418 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC15.67■□□□□ 0.1
CLRN1P58418 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CLRN1P58418 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC15.67■□□□□ 0.1
CLRN1P58418 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CLRN1P58418 AC139713.2-201ENST00000641328 2723 ntBASIC15.67■□□□□ 0.1
CLRN1P58418 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CLRN1P58418 LTB4R2-202ENST00000528054 3092 ntBASIC15.67■□□□□ 0.1
CLRN1P58418 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC15.67■□□□□ 0.1
CLRN1P58418 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
CLRN1P58418 AC125634.1-201ENST00000438758 1403 ntBASIC15.67■□□□□ 0.1
CLRN1P58418 PP12613-201ENST00000424958 2230 ntBASIC15.67■□□□□ 0.1
CLRN1P58418 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CLRN1P58418 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
CLRN1P58418 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CLRN1P58418 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CLRN1P58418 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
CLRN1P58418 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CLRN1P58418 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CLRN1P58418 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CLRN1P58418 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CLRN1P58418 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CLRN1P58418 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CLRN1P58418 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC15.67■□□□□ 0.1
CLRN1P58418 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CLRN1P58418 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CLRN1P58418 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CLRN1P58418 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CLRN1P58418 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CLRN1P58418 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC15.66■□□□□ 0.1
CLRN1P58418 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC15.66■□□□□ 0.1
CLRN1P58418 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
CLRN1P58418 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
CLRN1P58418 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CLRN1P58418 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC15.66■□□□□ 0.1
CLRN1P58418 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC15.66■□□□□ 0.1
CLRN1P58418 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
CLRN1P58418 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
CLRN1P58418 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CLRN1P58418 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC15.66■□□□□ 0.1
CLRN1P58418 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CLRN1P58418 AL845331.1-201ENST00000424978 1190 ntBASIC15.66■□□□□ 0.1
CLRN1P58418 PON3-205ENST00000451904 1053 ntTSL 3 BASIC15.66■□□□□ 0.1
CLRN1P58418 AC005336.2-201ENST00000593183 939 ntBASIC15.66■□□□□ 0.1
CLRN1P58418 Z69720.1-201ENST00000601483 472 ntBASIC15.66■□□□□ 0.1
CLRN1P58418 AL353801.3-201ENST00000609898 542 ntBASIC15.66■□□□□ 0.1
CLRN1P58418 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC15.66■□□□□ 0.1
CLRN1P58418 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms