Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
VSX2P58304 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
VSX2P58304 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
VSX2P58304 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
VSX2P58304 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
VSX2P58304 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC16.79■□□□□ 0.28
VSX2P58304 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC16.79■□□□□ 0.28
VSX2P58304 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
VSX2P58304 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC16.79■□□□□ 0.28
VSX2P58304 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
VSX2P58304 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
VSX2P58304 FAM197Y8-203ENST00000450145 560 ntBASIC16.79■□□□□ 0.28
VSX2P58304 SCARNA2-201ENST00000458748 420 ntBASIC16.79■□□□□ 0.28
VSX2P58304 AC009078.2-202ENST00000463353 338 ntBASIC16.79■□□□□ 0.28
VSX2P58304 AP002469.2-201ENST00000531724 424 ntBASIC16.79■□□□□ 0.28
VSX2P58304 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
VSX2P58304 AC019129.2-201ENST00000609837 1235 ntBASIC16.79■□□□□ 0.28
VSX2P58304 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
VSX2P58304 PMPCAP1-201ENST00000508114 1576 ntBASIC16.79■□□□□ 0.28
VSX2P58304 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
VSX2P58304 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
VSX2P58304 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC16.79■□□□□ 0.28
VSX2P58304 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC16.79■□□□□ 0.28
VSX2P58304 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
VSX2P58304 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC16.79■□□□□ 0.28
VSX2P58304 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
VSX2P58304 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
VSX2P58304 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC16.79■□□□□ 0.28
VSX2P58304 AC008764.6-201ENST00000595909 2069 ntBASIC16.79■□□□□ 0.28
VSX2P58304 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
VSX2P58304 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC16.79■□□□□ 0.28
VSX2P58304 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC16.79■□□□□ 0.28
VSX2P58304 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
VSX2P58304 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
VSX2P58304 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
VSX2P58304 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
VSX2P58304 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
VSX2P58304 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC16.78■□□□□ 0.28
VSX2P58304 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
VSX2P58304 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
VSX2P58304 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
VSX2P58304 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
VSX2P58304 AC006116.8-202ENST00000587620 1550 ntBASIC16.78■□□□□ 0.28
VSX2P58304 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
VSX2P58304 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
VSX2P58304 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
VSX2P58304 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
VSX2P58304 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
VSX2P58304 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC16.78■□□□□ 0.28
VSX2P58304 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC16.78■□□□□ 0.28
VSX2P58304 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC16.78■□□□□ 0.28
VSX2P58304 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
VSX2P58304 HIST2H3DP1-201ENST00000401004 416 ntBASIC16.78■□□□□ 0.28
VSX2P58304 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC16.78■□□□□ 0.28
VSX2P58304 IGHV3-52-201ENST00000519770 353 ntBASIC16.78■□□□□ 0.28
VSX2P58304 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
VSX2P58304 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
VSX2P58304 VPS51-217ENST00000639871 243 ntTSL 5 BASIC16.78■□□□□ 0.28
VSX2P58304 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
VSX2P58304 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
VSX2P58304 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
VSX2P58304 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
VSX2P58304 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC16.78■□□□□ 0.28
VSX2P58304 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
VSX2P58304 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
VSX2P58304 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
VSX2P58304 AL356309.3-201ENST00000624132 1934 ntBASIC16.78■□□□□ 0.28
VSX2P58304 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
VSX2P58304 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
VSX2P58304 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
VSX2P58304 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
VSX2P58304 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC16.78■□□□□ 0.28
VSX2P58304 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
VSX2P58304 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
VSX2P58304 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.28
VSX2P58304 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
VSX2P58304 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
VSX2P58304 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
VSX2P58304 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
VSX2P58304 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
VSX2P58304 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
VSX2P58304 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
VSX2P58304 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.28
VSX2P58304 REXO1L11P-201ENST00000620964 1927 ntBASIC16.77■□□□□ 0.28
VSX2P58304 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
VSX2P58304 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC16.77■□□□□ 0.28
VSX2P58304 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
VSX2P58304 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC16.77■□□□□ 0.28
VSX2P58304 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC16.77■□□□□ 0.28
VSX2P58304 MOK-208ENST00000519058 917 ntTSL 2 BASIC16.77■□□□□ 0.28
VSX2P58304 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
VSX2P58304 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC16.77■□□□□ 0.28
VSX2P58304 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC16.77■□□□□ 0.28
VSX2P58304 AL353593.2-201ENST00000602529 1483 ntBASIC16.77■□□□□ 0.28
VSX2P58304 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC16.77■□□□□ 0.27
VSX2P58304 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
VSX2P58304 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC16.77■□□□□ 0.27
VSX2P58304 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
VSX2P58304 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC16.77■□□□□ 0.27
VSX2P58304 HARS-201ENST00000307633 1780 ntTSL 2 BASIC16.77■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms