Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
CDH11P55287 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
CDH11P55287 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CDH11P55287 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDH11P55287 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CDH11P55287 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CDH11P55287 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDH11P55287 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC16.1■□□□□ 0.17
CDH11P55287 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC16.1■□□□□ 0.17
CDH11P55287 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CDH11P55287 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDH11P55287 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC16.09■□□□□ 0.17
CDH11P55287 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDH11P55287 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC16.09■□□□□ 0.17
CDH11P55287 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDH11P55287 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CDH11P55287 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDH11P55287 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CDH11P55287 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC16.09■□□□□ 0.17
CDH11P55287 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
CDH11P55287 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC16.09■□□□□ 0.17
CDH11P55287 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
CDH11P55287 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDH11P55287 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDH11P55287 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CDH11P55287 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDH11P55287 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC16.09■□□□□ 0.17
CDH11P55287 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDH11P55287 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDH11P55287 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
CDH11P55287 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC16.09■□□□□ 0.17
CDH11P55287 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDH11P55287 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC16.09■□□□□ 0.17
CDH11P55287 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDH11P55287 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDH11P55287 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CDH11P55287 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC16.09■□□□□ 0.17
CDH11P55287 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDH11P55287 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDH11P55287 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC16.09■□□□□ 0.17
CDH11P55287 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC16.09■□□□□ 0.17
CDH11P55287 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDH11P55287 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CDH11P55287 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC16.09■□□□□ 0.17
CDH11P55287 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
CDH11P55287 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDH11P55287 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC16.09■□□□□ 0.17
CDH11P55287 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDH11P55287 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
CDH11P55287 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
CDH11P55287 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.09■□□□□ 0.17
CDH11P55287 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
CDH11P55287 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDH11P55287 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC16.09■□□□□ 0.17
CDH11P55287 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDH11P55287 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDH11P55287 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDH11P55287 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
CDH11P55287 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDH11P55287 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDH11P55287 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC16.08■□□□□ 0.17
CDH11P55287 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC16.08■□□□□ 0.17
CDH11P55287 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
CDH11P55287 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
CDH11P55287 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.17
CDH11P55287 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC16.08■□□□□ 0.17
CDH11P55287 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC16.08■□□□□ 0.17
CDH11P55287 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
CDH11P55287 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
CDH11P55287 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC16.08■□□□□ 0.17
CDH11P55287 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC16.08■□□□□ 0.16
CDH11P55287 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
CDH11P55287 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.16
CDH11P55287 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CDH11P55287 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CDH11P55287 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CDH11P55287 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CDH11P55287 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC16.08■□□□□ 0.16
CDH11P55287 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
CDH11P55287 SEC1P-202ENST00000473944 940 ntBASIC16.08■□□□□ 0.16
CDH11P55287 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CDH11P55287 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC16.08■□□□□ 0.16
CDH11P55287 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC16.08■□□□□ 0.16
CDH11P55287 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC16.08■□□□□ 0.16
CDH11P55287 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC16.08■□□□□ 0.16
CDH11P55287 AC010240.3-201ENST00000607688 395 ntBASIC16.08■□□□□ 0.16
CDH11P55287 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC16.08■□□□□ 0.16
CDH11P55287 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
CDH11P55287 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CDH11P55287 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC16.08■□□□□ 0.16
CDH11P55287 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CDH11P55287 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CDH11P55287 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC16.08■□□□□ 0.16
CDH11P55287 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
CDH11P55287 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CDH11P55287 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CDH11P55287 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
CDH11P55287 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CDH11P55287 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC16.07■□□□□ 0.16
CDH11P55287 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms