Protein–RNA interactions for Protein: P55286

CDH8, Cadherin-8, humanhuman

Predictions only

Length 799 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8P55286 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDH8P55286 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDH8P55286 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDH8P55286 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC18.69■□□□□ 0.58
CDH8P55286 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CDH8P55286 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CDH8P55286 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDH8P55286 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC18.69■□□□□ 0.58
CDH8P55286 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC18.69■□□□□ 0.58
CDH8P55286 TK1-204ENST00000590430 683 ntTSL 3 BASIC18.69■□□□□ 0.58
CDH8P55286 VPS51-217ENST00000639871 243 ntTSL 5 BASIC18.69■□□□□ 0.58
CDH8P55286 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC18.69■□□□□ 0.58
CDH8P55286 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDH8P55286 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC18.69■□□□□ 0.58
CDH8P55286 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC18.69■□□□□ 0.58
CDH8P55286 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
CDH8P55286 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.69■□□□□ 0.58
CDH8P55286 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDH8P55286 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC18.69■□□□□ 0.58
CDH8P55286 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDH8P55286 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDH8P55286 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDH8P55286 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDH8P55286 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDH8P55286 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDH8P55286 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CDH8P55286 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDH8P55286 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDH8P55286 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CDH8P55286 MYCLP1-201ENST00000372451 1075 ntBASIC18.68■□□□□ 0.58
CDH8P55286 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDH8P55286 AC026396.1-201ENST00000419388 421 ntBASIC18.68■□□□□ 0.58
CDH8P55286 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC18.68■□□□□ 0.58
CDH8P55286 FAM197Y8-203ENST00000450145 560 ntBASIC18.68■□□□□ 0.58
CDH8P55286 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC18.68■□□□□ 0.58
CDH8P55286 AC009078.2-202ENST00000463353 338 ntBASIC18.68■□□□□ 0.58
CDH8P55286 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC18.68■□□□□ 0.58
CDH8P55286 CYB561-217ENST00000582997 877 ntTSL 5 BASIC18.68■□□□□ 0.58
CDH8P55286 CALM3-211ENST00000598871 561 ntTSL 4 BASIC18.68■□□□□ 0.58
CDH8P55286 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDH8P55286 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDH8P55286 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDH8P55286 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC18.68■□□□□ 0.58
CDH8P55286 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC18.68■□□□□ 0.58
CDH8P55286 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDH8P55286 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CDH8P55286 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CDH8P55286 AC009336.1-201ENST00000608941 1553 ntBASIC18.68■□□□□ 0.58
CDH8P55286 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC18.68■□□□□ 0.58
CDH8P55286 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDH8P55286 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
CDH8P55286 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDH8P55286 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDH8P55286 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDH8P55286 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDH8P55286 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDH8P55286 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC18.67■□□□□ 0.58
CDH8P55286 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CDH8P55286 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC18.67■□□□□ 0.58
CDH8P55286 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDH8P55286 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC18.67■□□□□ 0.58
CDH8P55286 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC18.67■□□□□ 0.58
CDH8P55286 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
CDH8P55286 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CDH8P55286 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CDH8P55286 AC003669.1-201ENST00000334569 611 ntBASIC18.67■□□□□ 0.58
CDH8P55286 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC18.67■□□□□ 0.58
CDH8P55286 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC18.67■□□□□ 0.58
CDH8P55286 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC18.67■□□□□ 0.58
CDH8P55286 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
CDH8P55286 AL020989.1-201ENST00000422979 469 ntBASIC18.67■□□□□ 0.58
CDH8P55286 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC18.67■□□□□ 0.58
CDH8P55286 AP002469.2-201ENST00000531724 424 ntBASIC18.67■□□□□ 0.58
CDH8P55286 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
CDH8P55286 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
CDH8P55286 AL160237.2-201ENST00000556165 472 ntBASIC18.67■□□□□ 0.58
CDH8P55286 IRF8-202ENST00000562492 946 ntTSL 3 BASIC18.67■□□□□ 0.58
CDH8P55286 AC021087.4-201ENST00000563761 564 ntBASIC18.67■□□□□ 0.58
CDH8P55286 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC18.67■□□□□ 0.58
CDH8P55286 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC18.67■□□□□ 0.58
CDH8P55286 COPE-211ENST00000600932 1144 ntTSL 5 BASIC18.67■□□□□ 0.58
CDH8P55286 AC073592.4-201ENST00000623827 446 ntBASIC18.67■□□□□ 0.58
CDH8P55286 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDH8P55286 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CDH8P55286 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDH8P55286 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDH8P55286 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC18.67■□□□□ 0.58
CDH8P55286 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CDH8P55286 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC18.67■□□□□ 0.58
CDH8P55286 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CDH8P55286 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDH8P55286 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
CDH8P55286 SIGLEC16-201ENST00000599858 1437 ntBASIC18.66■□□□□ 0.58
CDH8P55286 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDH8P55286 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDH8P55286 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC18.66■□□□□ 0.58
CDH8P55286 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CDH8P55286 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC18.66■□□□□ 0.58
CDH8P55286 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
CDH8P55286 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms