Protein–RNA interactions for Protein: P54284

CACNB3, Voltage-dependent L-type calcium channel subunit beta-3, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3P54284 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC20.66■□□□□ 0.9
CACNB3P54284 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CACNB3P54284 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CACNB3P54284 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CACNB3P54284 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CACNB3P54284 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
CACNB3P54284 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC20.65■□□□□ 0.9
CACNB3P54284 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
CACNB3P54284 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CACNB3P54284 AC092919.2-201ENST00000623631 1645 ntBASIC20.65■□□□□ 0.9
CACNB3P54284 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC20.65■□□□□ 0.9
CACNB3P54284 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CACNB3P54284 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CACNB3P54284 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC20.65■□□□□ 0.9
CACNB3P54284 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CACNB3P54284 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC20.65■□□□□ 0.9
CACNB3P54284 AC023141.13-201ENST00000604991 943 ntBASIC20.65■□□□□ 0.9
CACNB3P54284 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CACNB3P54284 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC20.65■□□□□ 0.9
CACNB3P54284 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
CACNB3P54284 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CACNB3P54284 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
CACNB3P54284 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CACNB3P54284 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
CACNB3P54284 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CACNB3P54284 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC20.64■□□□□ 0.9
CACNB3P54284 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC20.64■□□□□ 0.9
CACNB3P54284 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CACNB3P54284 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
CACNB3P54284 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC20.64■□□□□ 0.9
CACNB3P54284 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
CACNB3P54284 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
CACNB3P54284 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CACNB3P54284 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CACNB3P54284 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CACNB3P54284 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC20.64■□□□□ 0.89
CACNB3P54284 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CACNB3P54284 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CACNB3P54284 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CACNB3P54284 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC20.64■□□□□ 0.89
CACNB3P54284 CXCL1P1-201ENST00000502804 216 ntBASIC20.64■□□□□ 0.89
CACNB3P54284 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
CACNB3P54284 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CACNB3P54284 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CACNB3P54284 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC20.64■□□□□ 0.89
CACNB3P54284 AC093028.1-201ENST00000622998 982 ntBASIC20.64■□□□□ 0.89
CACNB3P54284 AC092902.6-201ENST00000641783 218 ntBASIC20.64■□□□□ 0.89
CACNB3P54284 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
CACNB3P54284 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CACNB3P54284 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC20.64■□□□□ 0.89
CACNB3P54284 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC20.64■□□□□ 0.89
CACNB3P54284 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC20.64■□□□□ 0.89
CACNB3P54284 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC20.64■□□□□ 0.89
CACNB3P54284 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC20.64■□□□□ 0.89
CACNB3P54284 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
CACNB3P54284 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC20.64■□□□□ 0.89
CACNB3P54284 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
CACNB3P54284 FLJ13224-201ENST00000313737 1514 ntBASIC20.63■□□□□ 0.89
CACNB3P54284 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CACNB3P54284 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CACNB3P54284 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CACNB3P54284 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CACNB3P54284 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC20.63■□□□□ 0.89
CACNB3P54284 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC20.63■□□□□ 0.89
CACNB3P54284 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CACNB3P54284 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
CACNB3P54284 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CACNB3P54284 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CACNB3P54284 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
CACNB3P54284 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC20.63■□□□□ 0.89
CACNB3P54284 AC046185.3-201ENST00000623228 1824 ntBASIC20.63■□□□□ 0.89
CACNB3P54284 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CACNB3P54284 AL139400.1-201ENST00000366220 510 ntBASIC20.63■□□□□ 0.89
CACNB3P54284 ACTG1P4-201ENST00000425123 1122 ntBASIC20.63■□□□□ 0.89
CACNB3P54284 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
CACNB3P54284 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC20.63■□□□□ 0.89
CACNB3P54284 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
CACNB3P54284 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC20.63■□□□□ 0.89
CACNB3P54284 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CACNB3P54284 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
CACNB3P54284 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC20.63■□□□□ 0.89
CACNB3P54284 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CACNB3P54284 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CACNB3P54284 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC20.63■□□□□ 0.89
CACNB3P54284 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CACNB3P54284 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CACNB3P54284 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CACNB3P54284 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
CACNB3P54284 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
CACNB3P54284 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC20.62■□□□□ 0.89
CACNB3P54284 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CACNB3P54284 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC20.62■□□□□ 0.89
CACNB3P54284 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
CACNB3P54284 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC20.62■□□□□ 0.89
CACNB3P54284 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CACNB3P54284 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC20.62■□□□□ 0.89
CACNB3P54284 AL645939.2-201ENST00000427340 991 ntBASIC20.62■□□□□ 0.89
CACNB3P54284 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC20.62■□□□□ 0.89
CACNB3P54284 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC20.62■□□□□ 0.89
CACNB3P54284 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms