Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 AP002383.4-201ENST00000442518 975 ntBASIC19.27■□□□□ 0.68
PMS1P54277 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
PMS1P54277 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PMS1P54277 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC19.27■□□□□ 0.68
PMS1P54277 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
PMS1P54277 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PMS1P54277 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
PMS1P54277 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC19.27■□□□□ 0.68
PMS1P54277 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PMS1P54277 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
PMS1P54277 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC19.27■□□□□ 0.68
PMS1P54277 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC19.27■□□□□ 0.68
PMS1P54277 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
PMS1P54277 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
PMS1P54277 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
PMS1P54277 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.67
PMS1P54277 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.67
PMS1P54277 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
PMS1P54277 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC19.27■□□□□ 0.67
PMS1P54277 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
PMS1P54277 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC19.27■□□□□ 0.67
PMS1P54277 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
PMS1P54277 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
PMS1P54277 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
PMS1P54277 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PMS1P54277 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PMS1P54277 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
PMS1P54277 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PMS1P54277 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PMS1P54277 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PMS1P54277 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
PMS1P54277 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
PMS1P54277 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC19.26■□□□□ 0.67
PMS1P54277 CHCHD2P8-201ENST00000429873 447 ntBASIC19.26■□□□□ 0.67
PMS1P54277 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
PMS1P54277 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PMS1P54277 BX276092.5-203ENST00000456199 560 ntBASIC19.26■□□□□ 0.67
PMS1P54277 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC19.26■□□□□ 0.67
PMS1P54277 AC122714.2-201ENST00000502787 707 ntBASIC19.26■□□□□ 0.67
PMS1P54277 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC19.26■□□□□ 0.67
PMS1P54277 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC19.26■□□□□ 0.67
PMS1P54277 AL121672.3-201ENST00000608644 468 ntBASIC19.26■□□□□ 0.67
PMS1P54277 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC19.26■□□□□ 0.67
PMS1P54277 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
PMS1P54277 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PMS1P54277 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
PMS1P54277 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC19.26■□□□□ 0.67
PMS1P54277 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
PMS1P54277 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC19.25■□□□□ 0.67
PMS1P54277 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PMS1P54277 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PMS1P54277 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PMS1P54277 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
PMS1P54277 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PMS1P54277 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
PMS1P54277 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
PMS1P54277 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
PMS1P54277 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
PMS1P54277 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PMS1P54277 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
PMS1P54277 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PMS1P54277 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC19.25■□□□□ 0.67
PMS1P54277 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PMS1P54277 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PMS1P54277 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
PMS1P54277 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC19.25■□□□□ 0.67
PMS1P54277 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PMS1P54277 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PMS1P54277 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC19.25■□□□□ 0.67
PMS1P54277 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC19.25■□□□□ 0.67
PMS1P54277 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC19.25■□□□□ 0.67
PMS1P54277 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC19.25■□□□□ 0.67
PMS1P54277 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC19.25■□□□□ 0.67
PMS1P54277 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC19.25■□□□□ 0.67
PMS1P54277 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
PMS1P54277 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC19.25■□□□□ 0.67
PMS1P54277 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PMS1P54277 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
PMS1P54277 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PMS1P54277 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC19.25■□□□□ 0.67
PMS1P54277 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PMS1P54277 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
PMS1P54277 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PMS1P54277 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC19.24■□□□□ 0.67
PMS1P54277 AGGF1P2-201ENST00000426656 2106 ntBASIC19.24■□□□□ 0.67
PMS1P54277 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PMS1P54277 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
PMS1P54277 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
PMS1P54277 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC19.24■□□□□ 0.67
PMS1P54277 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PMS1P54277 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PMS1P54277 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PMS1P54277 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
PMS1P54277 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PMS1P54277 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PMS1P54277 PCED1CP-201ENST00000419887 785 ntBASIC19.24■□□□□ 0.67
PMS1P54277 AC246785.2-201ENST00000432512 513 ntBASIC19.24■□□□□ 0.67
PMS1P54277 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC19.24■□□□□ 0.67
PMS1P54277 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC19.24■□□□□ 0.67
PMS1P54277 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms