Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC17.41■□□□□ 0.38
NUBP1P53384 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
NUBP1P53384 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC17.41■□□□□ 0.38
NUBP1P53384 IGHV3-62-201ENST00000520057 340 ntBASIC17.41■□□□□ 0.38
NUBP1P53384 STK25P1-201ENST00000585406 838 ntBASIC17.41■□□□□ 0.38
NUBP1P53384 AC004233.3-201ENST00000607794 1269 ntBASIC17.41■□□□□ 0.38
NUBP1P53384 AC023510.2-201ENST00000622162 746 ntBASIC17.41■□□□□ 0.38
NUBP1P53384 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
NUBP1P53384 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NUBP1P53384 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
NUBP1P53384 CHAC2-201ENST00000295304 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NUBP1P53384 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC17.41■□□□□ 0.38
NUBP1P53384 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NUBP1P53384 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
NUBP1P53384 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
NUBP1P53384 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NUBP1P53384 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
NUBP1P53384 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC17.41■□□□□ 0.38
NUBP1P53384 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
NUBP1P53384 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
NUBP1P53384 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NUBP1P53384 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
NUBP1P53384 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC17.4■□□□□ 0.38
NUBP1P53384 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
NUBP1P53384 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NUBP1P53384 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
NUBP1P53384 PWWP2AP1-201ENST00000429776 2273 ntBASIC17.4■□□□□ 0.38
NUBP1P53384 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
NUBP1P53384 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC17.4■□□□□ 0.38
NUBP1P53384 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC17.4■□□□□ 0.38
NUBP1P53384 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
NUBP1P53384 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
NUBP1P53384 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
NUBP1P53384 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC17.4■□□□□ 0.38
NUBP1P53384 AC012513.1-201ENST00000417481 784 ntTSL 2 BASIC17.4■□□□□ 0.38
NUBP1P53384 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC17.4■□□□□ 0.38
NUBP1P53384 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC17.4■□□□□ 0.38
NUBP1P53384 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
NUBP1P53384 AC025580.1-201ENST00000559553 729 ntTSL 5 BASIC17.4■□□□□ 0.38
NUBP1P53384 AL135744.1-201ENST00000565098 629 ntBASIC17.4■□□□□ 0.38
NUBP1P53384 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC17.4■□□□□ 0.38
NUBP1P53384 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC17.4■□□□□ 0.38
NUBP1P53384 AC017083.2-201ENST00000608069 979 ntBASIC17.4■□□□□ 0.38
NUBP1P53384 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC17.4■□□□□ 0.38
NUBP1P53384 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NUBP1P53384 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
NUBP1P53384 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
NUBP1P53384 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC17.4■□□□□ 0.38
NUBP1P53384 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NUBP1P53384 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NUBP1P53384 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
NUBP1P53384 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC17.39■□□□□ 0.38
NUBP1P53384 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC17.39■□□□□ 0.37
NUBP1P53384 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NUBP1P53384 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
NUBP1P53384 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
NUBP1P53384 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NUBP1P53384 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC17.39■□□□□ 0.37
NUBP1P53384 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC17.39■□□□□ 0.37
NUBP1P53384 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NUBP1P53384 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
NUBP1P53384 AC098614.1-201ENST00000368528 745 ntBASIC17.39■□□□□ 0.37
NUBP1P53384 RPS2P32-201ENST00000439199 892 ntBASIC17.39■□□□□ 0.37
NUBP1P53384 SPDYE14P-201ENST00000442619 822 ntBASIC17.39■□□□□ 0.37
NUBP1P53384 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC17.39■□□□□ 0.37
NUBP1P53384 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC17.39■□□□□ 0.37
NUBP1P53384 CYB561-216ENST00000582297 897 ntTSL 3 BASIC17.39■□□□□ 0.37
NUBP1P53384 TCEAL4-213ENST00000613326 1166 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
NUBP1P53384 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NUBP1P53384 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
NUBP1P53384 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NUBP1P53384 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
NUBP1P53384 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NUBP1P53384 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC17.39■□□□□ 0.37
NUBP1P53384 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NUBP1P53384 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
NUBP1P53384 AC083899.2-201ENST00000423285 1376 ntBASIC17.39■□□□□ 0.37
NUBP1P53384 AC132938.6-201ENST00000623828 1655 ntBASIC17.39■□□□□ 0.37
NUBP1P53384 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
NUBP1P53384 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC17.39■□□□□ 0.37
NUBP1P53384 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NUBP1P53384 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NUBP1P53384 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
NUBP1P53384 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC17.38■□□□□ 0.37
NUBP1P53384 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NUBP1P53384 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
NUBP1P53384 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC17.38■□□□□ 0.37
NUBP1P53384 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC17.38■□□□□ 0.37
NUBP1P53384 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
NUBP1P53384 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
NUBP1P53384 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC17.38■□□□□ 0.37
NUBP1P53384 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
NUBP1P53384 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NUBP1P53384 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
NUBP1P53384 AC018635.1-201ENST00000468292 1030 ntBASIC17.38■□□□□ 0.37
NUBP1P53384 MTND3P3-201ENST00000505004 126 ntBASIC17.38■□□□□ 0.37
NUBP1P53384 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC17.38■□□□□ 0.37
NUBP1P53384 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC17.38■□□□□ 0.37
NUBP1P53384 THTPA-204ENST00000554970 569 ntTSL 4 BASIC17.38■□□□□ 0.37
NUBP1P53384 THTPA-206ENST00000556015 535 ntTSL 3 BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms