Protein–RNA interactions for Protein: P52952

NKX2-5, Homeobox protein Nkx-2.5, humanhuman

Predicted RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-5P52952 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NKX2-5P52952 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
NKX2-5P52952 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
NKX2-5P52952 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
NKX2-5P52952 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC14.92□□□□□ -0.02
NKX2-5P52952 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
NKX2-5P52952 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC14.92□□□□□ -0.02
NKX2-5P52952 AC092437.1-201ENST00000624794 1048 ntBASIC14.92□□□□□ -0.02
NKX2-5P52952 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NKX2-5P52952 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NKX2-5P52952 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NKX2-5P52952 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC14.92□□□□□ -0.02
NKX2-5P52952 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
NKX2-5P52952 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
NKX2-5P52952 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NKX2-5P52952 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NKX2-5P52952 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
NKX2-5P52952 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC14.92□□□□□ -0.02
NKX2-5P52952 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
NKX2-5P52952 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
NKX2-5P52952 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
NKX2-5P52952 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
NKX2-5P52952 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
NKX2-5P52952 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC14.91□□□□□ -0.02
NKX2-5P52952 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
NKX2-5P52952 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
NKX2-5P52952 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NKX2-5P52952 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
NKX2-5P52952 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NKX2-5P52952 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC14.91□□□□□ -0.02
NKX2-5P52952 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
NKX2-5P52952 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
NKX2-5P52952 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC14.91□□□□□ -0.02
NKX2-5P52952 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
NKX2-5P52952 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC14.91□□□□□ -0.02
NKX2-5P52952 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NKX2-5P52952 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NKX2-5P52952 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
NKX2-5P52952 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
NKX2-5P52952 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC14.91□□□□□ -0.02
NKX2-5P52952 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NKX2-5P52952 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
NKX2-5P52952 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
NKX2-5P52952 SNCG-201ENST00000348795 684 ntTSL 2 BASIC14.91□□□□□ -0.02
NKX2-5P52952 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC14.91□□□□□ -0.02
NKX2-5P52952 MCRIP2P1-201ENST00000394346 511 ntBASIC14.91□□□□□ -0.02
NKX2-5P52952 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC14.91□□□□□ -0.02
NKX2-5P52952 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NKX2-5P52952 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
NKX2-5P52952 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC14.91□□□□□ -0.02
NKX2-5P52952 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC14.91□□□□□ -0.02
NKX2-5P52952 MIR4767-201ENST00000582827 78 ntBASIC14.91□□□□□ -0.02
NKX2-5P52952 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC14.91□□□□□ -0.02
NKX2-5P52952 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
NKX2-5P52952 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NKX2-5P52952 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
NKX2-5P52952 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC14.91□□□□□ -0.02
NKX2-5P52952 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
NKX2-5P52952 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NKX2-5P52952 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NKX2-5P52952 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
NKX2-5P52952 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC14.91□□□□□ -0.02
NKX2-5P52952 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
NKX2-5P52952 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC14.91□□□□□ -0.02
NKX2-5P52952 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NKX2-5P52952 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC14.9□□□□□ -0.02
NKX2-5P52952 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
NKX2-5P52952 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
NKX2-5P52952 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NKX2-5P52952 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
NKX2-5P52952 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
NKX2-5P52952 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
NKX2-5P52952 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
NKX2-5P52952 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
NKX2-5P52952 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC14.9□□□□□ -0.02
NKX2-5P52952 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC14.9□□□□□ -0.02
NKX2-5P52952 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
NKX2-5P52952 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NKX2-5P52952 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NKX2-5P52952 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
NKX2-5P52952 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC14.9□□□□□ -0.02
NKX2-5P52952 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC14.9□□□□□ -0.02
NKX2-5P52952 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
NKX2-5P52952 AL035685.1-201ENST00000636663 812 ntBASIC14.9□□□□□ -0.02
NKX2-5P52952 ADM-208ENST00000534464 1640 ntTSL 2 BASIC14.9□□□□□ -0.02
NKX2-5P52952 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
NKX2-5P52952 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NKX2-5P52952 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NKX2-5P52952 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
NKX2-5P52952 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
NKX2-5P52952 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
NKX2-5P52952 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
NKX2-5P52952 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NKX2-5P52952 CNTNAP3P2-201ENST00000617175 3861 ntBASIC14.9□□□□□ -0.02
NKX2-5P52952 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NKX2-5P52952 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NKX2-5P52952 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NKX2-5P52952 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
NKX2-5P52952 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC14.89□□□□□ -0.03
NKX2-5P52952 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms