Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
SMSP52788 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.22
SMSP52788 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SMSP52788 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC16.45■□□□□ 0.22
SMSP52788 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SMSP52788 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC16.45■□□□□ 0.22
SMSP52788 PCDHA12-202ENST00000613593 2588 ntBASIC16.45■□□□□ 0.22
SMSP52788 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
SMSP52788 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SMSP52788 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC16.45■□□□□ 0.22
SMSP52788 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SMSP52788 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
SMSP52788 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SMSP52788 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC16.45■□□□□ 0.22
SMSP52788 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC16.45■□□□□ 0.22
SMSP52788 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
SMSP52788 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC16.45■□□□□ 0.22
SMSP52788 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC16.45■□□□□ 0.22
SMSP52788 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SMSP52788 AC106795.1-205ENST00000512851 1056 ntBASIC16.45■□□□□ 0.22
SMSP52788 AP002469.2-201ENST00000531724 424 ntBASIC16.45■□□□□ 0.22
SMSP52788 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC16.45■□□□□ 0.22
SMSP52788 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC16.45■□□□□ 0.22
SMSP52788 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
SMSP52788 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC16.45■□□□□ 0.22
SMSP52788 CALM3-211ENST00000598871 561 ntTSL 4 BASIC16.45■□□□□ 0.22
SMSP52788 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
SMSP52788 AC099336.1-202ENST00000602961 463 ntBASIC16.45■□□□□ 0.22
SMSP52788 AC064862.7-201ENST00000604520 867 ntBASIC16.45■□□□□ 0.22
SMSP52788 AC006538.3-201ENST00000612495 578 ntBASIC16.45■□□□□ 0.22
SMSP52788 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC16.45■□□□□ 0.22
SMSP52788 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SMSP52788 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
SMSP52788 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
SMSP52788 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC16.45■□□□□ 0.22
SMSP52788 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC16.45■□□□□ 0.22
SMSP52788 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SMSP52788 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SMSP52788 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
SMSP52788 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC16.45■□□□□ 0.22
SMSP52788 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
SMSP52788 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC16.45■□□□□ 0.22
SMSP52788 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC16.45■□□□□ 0.22
SMSP52788 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SMSP52788 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
SMSP52788 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SMSP52788 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
SMSP52788 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
SMSP52788 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SMSP52788 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SMSP52788 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SMSP52788 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SMSP52788 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SMSP52788 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SMSP52788 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
SMSP52788 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC16.44■□□□□ 0.22
SMSP52788 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC16.44■□□□□ 0.22
SMSP52788 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SMSP52788 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SMSP52788 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC16.44■□□□□ 0.22
SMSP52788 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC16.44■□□□□ 0.22
SMSP52788 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SMSP52788 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SMSP52788 AC080080.1-201ENST00000625121 2420 ntBASIC16.44■□□□□ 0.22
SMSP52788 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SMSP52788 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SMSP52788 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
SMSP52788 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
SMSP52788 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SMSP52788 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SMSP52788 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC16.44■□□□□ 0.22
SMSP52788 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC16.44■□□□□ 0.22
SMSP52788 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC16.44■□□□□ 0.22
SMSP52788 MIR3180-4-201ENST00000582223 153 ntBASIC16.44■□□□□ 0.22
SMSP52788 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC16.44■□□□□ 0.22
SMSP52788 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC16.44■□□□□ 0.22
SMSP52788 GPR32P1-201ENST00000601788 811 ntBASIC16.44■□□□□ 0.22
SMSP52788 AL390719.2-201ENST00000606993 987 ntBASIC16.44■□□□□ 0.22
SMSP52788 AL353801.3-201ENST00000609898 542 ntBASIC16.44■□□□□ 0.22
SMSP52788 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC16.44■□□□□ 0.22
SMSP52788 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC16.44■□□□□ 0.22
SMSP52788 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SMSP52788 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SMSP52788 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SMSP52788 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SMSP52788 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SMSP52788 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
SMSP52788 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
SMSP52788 ASL-204ENST00000395331 1538 ntTSL 5 BASIC16.44■□□□□ 0.22
SMSP52788 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
SMSP52788 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC16.44■□□□□ 0.22
SMSP52788 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
SMSP52788 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC16.44■□□□□ 0.22
SMSP52788 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC16.44■□□□□ 0.22
SMSP52788 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
SMSP52788 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
SMSP52788 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SMSP52788 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SMSP52788 BANP-227ENST00000626016 2144 ntTSL 2 BASIC16.43■□□□□ 0.22
SMSP52788 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms