Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CPT1AP50416 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CPT1AP50416 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CPT1AP50416 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC19.31■□□□□ 0.68
CPT1AP50416 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC19.31■□□□□ 0.68
CPT1AP50416 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CPT1AP50416 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CPT1AP50416 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CPT1AP50416 STOM-202ENST00000347359 870 ntTSL 2 BASIC19.31■□□□□ 0.68
CPT1AP50416 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC19.31■□□□□ 0.68
CPT1AP50416 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
CPT1AP50416 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC19.31■□□□□ 0.68
CPT1AP50416 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC19.31■□□□□ 0.68
CPT1AP50416 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC19.31■□□□□ 0.68
CPT1AP50416 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC19.31■□□□□ 0.68
CPT1AP50416 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CPT1AP50416 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CPT1AP50416 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CPT1AP50416 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC19.31■□□□□ 0.68
CPT1AP50416 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CPT1AP50416 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CPT1AP50416 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CPT1AP50416 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC19.31■□□□□ 0.68
CPT1AP50416 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC19.3■□□□□ 0.68
CPT1AP50416 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CPT1AP50416 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC19.3■□□□□ 0.68
CPT1AP50416 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CPT1AP50416 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC19.3■□□□□ 0.68
CPT1AP50416 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC19.3■□□□□ 0.68
CPT1AP50416 AC090164.3-201ENST00000610780 2143 ntBASIC19.3■□□□□ 0.68
CPT1AP50416 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CPT1AP50416 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CPT1AP50416 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CPT1AP50416 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CPT1AP50416 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
CPT1AP50416 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
CPT1AP50416 TSEN15P1-201ENST00000423257 515 ntBASIC19.3■□□□□ 0.68
CPT1AP50416 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CPT1AP50416 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC19.3■□□□□ 0.68
CPT1AP50416 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CPT1AP50416 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC19.3■□□□□ 0.68
CPT1AP50416 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC19.3■□□□□ 0.68
CPT1AP50416 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC19.3■□□□□ 0.68
CPT1AP50416 AC004835.2-201ENST00000603762 682 ntBASIC19.3■□□□□ 0.68
CPT1AP50416 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC19.3■□□□□ 0.68
CPT1AP50416 AC092902.6-201ENST00000641783 218 ntBASIC19.3■□□□□ 0.68
CPT1AP50416 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CPT1AP50416 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CPT1AP50416 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CPT1AP50416 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CPT1AP50416 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CPT1AP50416 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CPT1AP50416 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CPT1AP50416 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC19.3■□□□□ 0.68
CPT1AP50416 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
CPT1AP50416 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CPT1AP50416 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
CPT1AP50416 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CPT1AP50416 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CPT1AP50416 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CPT1AP50416 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CPT1AP50416 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CPT1AP50416 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
CPT1AP50416 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CPT1AP50416 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CPT1AP50416 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CPT1AP50416 AL513480.1-201ENST00000451731 511 ntBASIC19.29■□□□□ 0.68
CPT1AP50416 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
CPT1AP50416 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
CPT1AP50416 REXO1L3P-201ENST00000622202 1288 ntBASIC19.29■□□□□ 0.68
CPT1AP50416 AL513210.1-201ENST00000629608 234 ntBASIC19.29■□□□□ 0.68
CPT1AP50416 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CPT1AP50416 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CPT1AP50416 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
CPT1AP50416 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC19.29■□□□□ 0.68
CPT1AP50416 TNXA-203ENST00000507684 2038 ntBASIC19.29■□□□□ 0.68
CPT1AP50416 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CPT1AP50416 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
CPT1AP50416 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CPT1AP50416 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC19.28■□□□□ 0.68
CPT1AP50416 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CPT1AP50416 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
CPT1AP50416 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CPT1AP50416 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CPT1AP50416 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CPT1AP50416 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CPT1AP50416 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
CPT1AP50416 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC19.28■□□□□ 0.68
CPT1AP50416 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CPT1AP50416 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CPT1AP50416 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC19.28■□□□□ 0.68
CPT1AP50416 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CPT1AP50416 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
CPT1AP50416 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CPT1AP50416 PAWRP1-201ENST00000451083 565 ntBASIC19.28■□□□□ 0.68
CPT1AP50416 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC19.28■□□□□ 0.68
CPT1AP50416 AC106028.4-201ENST00000614509 607 ntBASIC19.28■□□□□ 0.68
CPT1AP50416 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CPT1AP50416 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CPT1AP50416 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms