Protein–RNA interactions for Protein: P47224

RABIF, Guanine nucleotide exchange factor MSS4, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RABIFP47224 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RABIFP47224 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
RABIFP47224 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RABIFP47224 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RABIFP47224 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC17.12■□□□□ 0.33
RABIFP47224 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC17.12■□□□□ 0.33
RABIFP47224 AC112482.1-201ENST00000492080 688 ntBASIC17.12■□□□□ 0.33
RABIFP47224 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC17.12■□□□□ 0.33
RABIFP47224 CIPC-205ENST00000555437 566 ntTSL 3 BASIC17.12■□□□□ 0.33
RABIFP47224 RIN3-211ENST00000557762 517 ntTSL 3 BASIC17.12■□□□□ 0.33
RABIFP47224 COX5A-206ENST00000568783 571 ntTSL 3 BASIC17.12■□□□□ 0.33
RABIFP47224 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
RABIFP47224 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RABIFP47224 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC17.12■□□□□ 0.33
RABIFP47224 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC17.12■□□□□ 0.33
RABIFP47224 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
RABIFP47224 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RABIFP47224 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
RABIFP47224 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RABIFP47224 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RABIFP47224 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RABIFP47224 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
RABIFP47224 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RABIFP47224 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RABIFP47224 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
RABIFP47224 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
RABIFP47224 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC17.11■□□□□ 0.33
RABIFP47224 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC17.11■□□□□ 0.33
RABIFP47224 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
RABIFP47224 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
RABIFP47224 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC17.11■□□□□ 0.33
RABIFP47224 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RABIFP47224 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RABIFP47224 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RABIFP47224 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RABIFP47224 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
RABIFP47224 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
RABIFP47224 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RABIFP47224 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
RABIFP47224 COA5-202ENST00000409997 557 ntTSL 4 BASIC17.11■□□□□ 0.33
RABIFP47224 MCCD1P2-201ENST00000423228 335 ntBASIC17.11■□□□□ 0.33
RABIFP47224 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC17.11■□□□□ 0.33
RABIFP47224 DHDH-204ENST00000523250 634 ntTSL 5 BASIC17.11■□□□□ 0.33
RABIFP47224 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC17.11■□□□□ 0.33
RABIFP47224 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC17.11■□□□□ 0.33
RABIFP47224 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC17.11■□□□□ 0.33
RABIFP47224 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RABIFP47224 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RABIFP47224 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RABIFP47224 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RABIFP47224 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
RABIFP47224 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RABIFP47224 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
RABIFP47224 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC17.11■□□□□ 0.33
RABIFP47224 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC17.11■□□□□ 0.33
RABIFP47224 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RABIFP47224 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RABIFP47224 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RABIFP47224 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RABIFP47224 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
RABIFP47224 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC17.11■□□□□ 0.33
RABIFP47224 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC17.11■□□□□ 0.33
RABIFP47224 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RABIFP47224 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RABIFP47224 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC17.11■□□□□ 0.33
RABIFP47224 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC17.11■□□□□ 0.33
RABIFP47224 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RABIFP47224 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC17.11■□□□□ 0.33
RABIFP47224 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
RABIFP47224 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RABIFP47224 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC17.1■□□□□ 0.33
RABIFP47224 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
RABIFP47224 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC17.1■□□□□ 0.33
RABIFP47224 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RABIFP47224 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RABIFP47224 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RABIFP47224 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RABIFP47224 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC17.1■□□□□ 0.33
RABIFP47224 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RABIFP47224 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RABIFP47224 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC17.1■□□□□ 0.33
RABIFP47224 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
RABIFP47224 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
RABIFP47224 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC17.1■□□□□ 0.33
RABIFP47224 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RABIFP47224 AL139327.4-201ENST00000612362 153 ntBASIC17.1■□□□□ 0.33
RABIFP47224 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
RABIFP47224 AC055717.3-201ENST00000622967 595 ntBASIC17.1■□□□□ 0.33
RABIFP47224 AC079781.4-201ENST00000641908 219 ntBASIC17.1■□□□□ 0.33
RABIFP47224 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC17.1■□□□□ 0.33
RABIFP47224 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
RABIFP47224 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RABIFP47224 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RABIFP47224 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
RABIFP47224 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RABIFP47224 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RABIFP47224 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC17.1■□□□□ 0.33
RABIFP47224 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC17.1■□□□□ 0.33
RABIFP47224 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RABIFP47224 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms