Protein–RNA interactions for Protein: P37088

SCNN1A, Amiloride-sensitive sodium channel subunit alpha, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1AP37088 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
SCNN1AP37088 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC18.2■□□□□ 0.5
SCNN1AP37088 MTDHP3-201ENST00000594186 672 ntBASIC18.2■□□□□ 0.5
SCNN1AP37088 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SCNN1AP37088 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC18.2■□□□□ 0.5
SCNN1AP37088 AC008608.2-201ENST00000606089 416 ntBASIC18.2■□□□□ 0.5
SCNN1AP37088 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
SCNN1AP37088 AL022326.1-202ENST00000641533 845 ntBASIC18.2■□□□□ 0.5
SCNN1AP37088 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
SCNN1AP37088 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC18.2■□□□□ 0.5
SCNN1AP37088 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC18.2■□□□□ 0.5
SCNN1AP37088 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
SCNN1AP37088 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
SCNN1AP37088 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
SCNN1AP37088 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
SCNN1AP37088 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SCNN1AP37088 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SCNN1AP37088 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SCNN1AP37088 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC18.19■□□□□ 0.5
SCNN1AP37088 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
SCNN1AP37088 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SCNN1AP37088 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SCNN1AP37088 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SCNN1AP37088 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SCNN1AP37088 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SCNN1AP37088 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
SCNN1AP37088 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SCNN1AP37088 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SCNN1AP37088 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
SCNN1AP37088 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
SCNN1AP37088 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SCNN1AP37088 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SCNN1AP37088 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC18.19■□□□□ 0.5
SCNN1AP37088 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC18.19■□□□□ 0.5
SCNN1AP37088 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC18.19■□□□□ 0.5
SCNN1AP37088 S100A2-206ENST00000497140 697 ntTSL 2 BASIC18.19■□□□□ 0.5
SCNN1AP37088 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC18.19■□□□□ 0.5
SCNN1AP37088 TOLLIP-AS1-201ENST00000530897 939 ntBASIC18.19■□□□□ 0.5
SCNN1AP37088 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC18.19■□□□□ 0.5
SCNN1AP37088 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
SCNN1AP37088 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC18.19■□□□□ 0.5
SCNN1AP37088 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC18.19■□□□□ 0.5
SCNN1AP37088 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC18.19■□□□□ 0.5
SCNN1AP37088 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SCNN1AP37088 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC18.19■□□□□ 0.5
SCNN1AP37088 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
SCNN1AP37088 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SCNN1AP37088 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC18.19■□□□□ 0.5
SCNN1AP37088 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
SCNN1AP37088 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC18.19■□□□□ 0.5
SCNN1AP37088 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SCNN1AP37088 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC18.18■□□□□ 0.5
SCNN1AP37088 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SCNN1AP37088 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SCNN1AP37088 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC18.18■□□□□ 0.5
SCNN1AP37088 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC18.18■□□□□ 0.5
SCNN1AP37088 AC093525.9-201ENST00000624961 1746 ntBASIC18.18■□□□□ 0.5
SCNN1AP37088 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SCNN1AP37088 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC18.18■□□□□ 0.5
SCNN1AP37088 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
SCNN1AP37088 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC18.18■□□□□ 0.5
SCNN1AP37088 SCARNA2-201ENST00000458748 420 ntBASIC18.18■□□□□ 0.5
SCNN1AP37088 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SCNN1AP37088 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC18.18■□□□□ 0.5
SCNN1AP37088 BMF-207ENST00000559701 630 ntTSL 3 BASIC18.18■□□□□ 0.5
SCNN1AP37088 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC18.18■□□□□ 0.5
SCNN1AP37088 IRF8-202ENST00000562492 946 ntTSL 3 BASIC18.18■□□□□ 0.5
SCNN1AP37088 COPE-211ENST00000600932 1144 ntTSL 5 BASIC18.18■□□□□ 0.5
SCNN1AP37088 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC18.18■□□□□ 0.5
SCNN1AP37088 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
SCNN1AP37088 AC026471.1-201ENST00000564629 3026 ntBASIC18.18■□□□□ 0.5
SCNN1AP37088 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SCNN1AP37088 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SCNN1AP37088 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
SCNN1AP37088 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
SCNN1AP37088 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SCNN1AP37088 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC18.18■□□□□ 0.5
SCNN1AP37088 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SCNN1AP37088 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SCNN1AP37088 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SCNN1AP37088 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SCNN1AP37088 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
SCNN1AP37088 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SCNN1AP37088 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SCNN1AP37088 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SCNN1AP37088 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
SCNN1AP37088 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
SCNN1AP37088 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SCNN1AP37088 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SCNN1AP37088 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
SCNN1AP37088 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC18.17■□□□□ 0.5
SCNN1AP37088 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
SCNN1AP37088 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC18.17■□□□□ 0.5
SCNN1AP37088 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
SCNN1AP37088 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
SCNN1AP37088 UNC93B7-201ENST00000509439 705 ntBASIC18.17■□□□□ 0.5
SCNN1AP37088 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SCNN1AP37088 AF238378.1-201ENST00000526806 358 ntBASIC18.17■□□□□ 0.5
SCNN1AP37088 NKAPP1-205ENST00000585790 367 ntBASIC18.17■□□□□ 0.5
SCNN1AP37088 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms