Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC12.93□□□□□ -0.34
CKS2P33552 TBC1D3P2-202ENST00000577902 1649 ntBASIC12.93□□□□□ -0.34
CKS2P33552 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CKS2P33552 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CKS2P33552 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CKS2P33552 BUB3-202ENST00000368859 667 ntTSL 3 BASIC12.93□□□□□ -0.34
CKS2P33552 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC12.93□□□□□ -0.34
CKS2P33552 NIFKP9-201ENST00000419265 221 ntBASIC12.93□□□□□ -0.34
CKS2P33552 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC12.93□□□□□ -0.34
CKS2P33552 CDCA4P2-201ENST00000441182 718 ntBASIC12.93□□□□□ -0.34
CKS2P33552 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC12.93□□□□□ -0.34
CKS2P33552 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC12.93□□□□□ -0.34
CKS2P33552 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC12.93□□□□□ -0.34
CKS2P33552 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC12.93□□□□□ -0.34
CKS2P33552 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC12.93□□□□□ -0.34
CKS2P33552 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC12.93□□□□□ -0.34
CKS2P33552 MIR3180-5-201ENST00000583743 153 ntBASIC12.93□□□□□ -0.34
CKS2P33552 PFKL-212ENST00000628044 129 ntTSL 3 BASIC12.93□□□□□ -0.34
CKS2P33552 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC12.93□□□□□ -0.34
CKS2P33552 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC12.93□□□□□ -0.34
CKS2P33552 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
CKS2P33552 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CKS2P33552 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CKS2P33552 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CKS2P33552 AC016396.2-201ENST00000562575 1417 ntBASIC12.93□□□□□ -0.34
CKS2P33552 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CKS2P33552 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC12.93□□□□□ -0.34
CKS2P33552 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CKS2P33552 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CKS2P33552 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
CKS2P33552 AC036111.1-201ENST00000533973 1582 ntBASIC12.93□□□□□ -0.34
CKS2P33552 AC068418.2-201ENST00000577309 3703 ntBASIC12.93□□□□□ -0.34
CKS2P33552 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC12.93□□□□□ -0.34
CKS2P33552 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CKS2P33552 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC12.93□□□□□ -0.34
CKS2P33552 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
CKS2P33552 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CKS2P33552 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
CKS2P33552 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC12.93□□□□□ -0.34
CKS2P33552 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
CKS2P33552 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
CKS2P33552 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
CKS2P33552 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CKS2P33552 FUK-207ENST00000571514 3054 ntTSL 2 BASIC12.92□□□□□ -0.34
CKS2P33552 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CKS2P33552 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CKS2P33552 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CKS2P33552 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
CKS2P33552 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CKS2P33552 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CKS2P33552 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC12.92□□□□□ -0.34
CKS2P33552 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
CKS2P33552 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CKS2P33552 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
CKS2P33552 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CKS2P33552 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC12.92□□□□□ -0.34
CKS2P33552 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC12.92□□□□□ -0.34
CKS2P33552 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CKS2P33552 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CKS2P33552 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CKS2P33552 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
CKS2P33552 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
CKS2P33552 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CKS2P33552 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CKS2P33552 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
CKS2P33552 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CKS2P33552 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CKS2P33552 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC12.92□□□□□ -0.34
CKS2P33552 PPP1R14BP5-201ENST00000440334 435 ntBASIC12.92□□□□□ -0.34
CKS2P33552 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CKS2P33552 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CKS2P33552 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC12.92□□□□□ -0.34
CKS2P33552 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
CKS2P33552 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC12.92□□□□□ -0.34
CKS2P33552 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC12.92□□□□□ -0.34
CKS2P33552 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CKS2P33552 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
CKS2P33552 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC12.92□□□□□ -0.34
CKS2P33552 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC12.92□□□□□ -0.34
CKS2P33552 NAT14-202ENST00000587400 416 ntTSL 5 BASIC12.92□□□□□ -0.34
CKS2P33552 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC12.92□□□□□ -0.34
CKS2P33552 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC12.92□□□□□ -0.34
CKS2P33552 AC005915.1-201ENST00000624912 2018 ntBASIC12.92□□□□□ -0.34
CKS2P33552 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CKS2P33552 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CKS2P33552 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
CKS2P33552 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CKS2P33552 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CKS2P33552 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC12.92□□□□□ -0.34
CKS2P33552 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC12.92□□□□□ -0.34
CKS2P33552 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
CKS2P33552 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
CKS2P33552 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC12.92□□□□□ -0.34
CKS2P33552 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CKS2P33552 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
CKS2P33552 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CKS2P33552 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC12.92□□□□□ -0.34
CKS2P33552 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC12.92□□□□□ -0.34
CKS2P33552 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC12.92□□□□□ -0.34
CKS2P33552 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 67.7 ms