Protein–RNA interactions for Protein: P31270

HOXA11, Homeobox protein Hox-A11, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA11P31270 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HOXA11P31270 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
HOXA11P31270 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HOXA11P31270 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
HOXA11P31270 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC18.87■□□□□ 0.61
HOXA11P31270 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HOXA11P31270 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HOXA11P31270 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
HOXA11P31270 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
HOXA11P31270 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC18.86■□□□□ 0.61
HOXA11P31270 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC18.86■□□□□ 0.61
HOXA11P31270 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HOXA11P31270 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HOXA11P31270 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
HOXA11P31270 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HOXA11P31270 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HOXA11P31270 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC18.86■□□□□ 0.61
HOXA11P31270 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC18.86■□□□□ 0.61
HOXA11P31270 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HOXA11P31270 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HOXA11P31270 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC18.86■□□□□ 0.61
HOXA11P31270 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC18.86■□□□□ 0.61
HOXA11P31270 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HOXA11P31270 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HOXA11P31270 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HOXA11P31270 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
HOXA11P31270 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HOXA11P31270 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
HOXA11P31270 UPF3AP3-201ENST00000420996 769 ntBASIC18.86■□□□□ 0.61
HOXA11P31270 HNRNPA1P28-201ENST00000424481 961 ntBASIC18.86■□□□□ 0.61
HOXA11P31270 FIS1-203ENST00000442303 631 ntTSL 3 BASIC18.86■□□□□ 0.61
HOXA11P31270 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC18.86■□□□□ 0.61
HOXA11P31270 AC112482.1-201ENST00000492080 688 ntBASIC18.86■□□□□ 0.61
HOXA11P31270 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC18.86■□□□□ 0.61
HOXA11P31270 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC18.86■□□□□ 0.61
HOXA11P31270 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC18.86■□□□□ 0.61
HOXA11P31270 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC18.86■□□□□ 0.61
HOXA11P31270 GGTLC5P-201ENST00000617623 998 ntBASIC18.86■□□□□ 0.61
HOXA11P31270 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
HOXA11P31270 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC18.86■□□□□ 0.61
HOXA11P31270 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HOXA11P31270 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.86■□□□□ 0.61
HOXA11P31270 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HOXA11P31270 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC18.86■□□□□ 0.61
HOXA11P31270 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
HOXA11P31270 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
HOXA11P31270 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HOXA11P31270 AC133963.1-201ENST00000504166 1679 ntBASIC18.85■□□□□ 0.61
HOXA11P31270 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
HOXA11P31270 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
HOXA11P31270 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
HOXA11P31270 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
HOXA11P31270 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
HOXA11P31270 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
HOXA11P31270 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
HOXA11P31270 MIR1233-2-201ENST00000408138 82 ntBASIC18.85■□□□□ 0.61
HOXA11P31270 MIR1233-1-201ENST00000408722 82 ntBASIC18.85■□□□□ 0.61
HOXA11P31270 GPX1P2-201ENST00000429271 606 ntBASIC18.85■□□□□ 0.61
HOXA11P31270 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC18.85■□□□□ 0.61
HOXA11P31270 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC18.85■□□□□ 0.61
HOXA11P31270 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
HOXA11P31270 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC18.85■□□□□ 0.61
HOXA11P31270 COX5A-206ENST00000568783 571 ntTSL 3 BASIC18.85■□□□□ 0.61
HOXA11P31270 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC18.85■□□□□ 0.61
HOXA11P31270 AC010654.1-201ENST00000615722 808 ntBASIC18.85■□□□□ 0.61
HOXA11P31270 HOTTIP_1.1-201ENST00000620415 57 ntBASIC18.85■□□□□ 0.61
HOXA11P31270 AC092865.6-201ENST00000642101 219 ntBASIC18.85■□□□□ 0.61
HOXA11P31270 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HOXA11P31270 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC18.85■□□□□ 0.61
HOXA11P31270 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HOXA11P31270 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
HOXA11P31270 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HOXA11P31270 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HOXA11P31270 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
HOXA11P31270 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
HOXA11P31270 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HOXA11P31270 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
HOXA11P31270 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HOXA11P31270 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
HOXA11P31270 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HOXA11P31270 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HOXA11P31270 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HOXA11P31270 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC18.84■□□□□ 0.61
HOXA11P31270 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC18.84■□□□□ 0.61
HOXA11P31270 PI4KAP1-204ENST00000612579 1703 ntBASIC18.84■□□□□ 0.61
HOXA11P31270 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
HOXA11P31270 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HOXA11P31270 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
HOXA11P31270 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC18.84■□□□□ 0.61
HOXA11P31270 MRPL20P1-201ENST00000400819 433 ntBASIC18.84■□□□□ 0.61
HOXA11P31270 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC18.84■□□□□ 0.61
HOXA11P31270 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC18.84■□□□□ 0.61
HOXA11P31270 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC18.84■□□□□ 0.61
HOXA11P31270 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC18.84■□□□□ 0.61
HOXA11P31270 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC18.84■□□□□ 0.61
HOXA11P31270 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
HOXA11P31270 POLD4-207ENST00000531239 584 ntTSL 2 BASIC18.84■□□□□ 0.61
HOXA11P31270 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC18.84■□□□□ 0.61
HOXA11P31270 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC18.84■□□□□ 0.61
HOXA11P31270 AC018845.2-201ENST00000568326 409 ntBASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms