Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
COL8A2P25067 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC14.81□□□□□ -0.04
COL8A2P25067 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
COL8A2P25067 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC14.81□□□□□ -0.04
COL8A2P25067 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
COL8A2P25067 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
COL8A2P25067 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
COL8A2P25067 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
COL8A2P25067 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC14.81□□□□□ -0.04
COL8A2P25067 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
COL8A2P25067 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC14.81□□□□□ -0.04
COL8A2P25067 AC092910.1-201ENST00000482027 1129 ntBASIC14.81□□□□□ -0.04
COL8A2P25067 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC14.81□□□□□ -0.04
COL8A2P25067 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC14.81□□□□□ -0.04
COL8A2P25067 MNT-208ENST00000575394 606 ntTSL 4 BASIC14.81□□□□□ -0.04
COL8A2P25067 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC14.81□□□□□ -0.04
COL8A2P25067 AL022326.1-202ENST00000641533 845 ntBASIC14.81□□□□□ -0.04
COL8A2P25067 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC14.81□□□□□ -0.04
COL8A2P25067 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC14.81□□□□□ -0.04
COL8A2P25067 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
COL8A2P25067 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
COL8A2P25067 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC14.81□□□□□ -0.04
COL8A2P25067 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
COL8A2P25067 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
COL8A2P25067 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
COL8A2P25067 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
COL8A2P25067 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC14.81□□□□□ -0.04
COL8A2P25067 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
COL8A2P25067 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC14.81□□□□□ -0.04
COL8A2P25067 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC14.81□□□□□ -0.04
COL8A2P25067 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
COL8A2P25067 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC14.81□□□□□ -0.04
COL8A2P25067 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
COL8A2P25067 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC14.81□□□□□ -0.04
COL8A2P25067 HLA-J-201ENST00000462773 1622 ntBASIC14.81□□□□□ -0.04
COL8A2P25067 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC14.8□□□□□ -0.04
COL8A2P25067 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
COL8A2P25067 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
COL8A2P25067 AC132938.5-201ENST00000624980 1813 ntBASIC14.8□□□□□ -0.04
COL8A2P25067 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
COL8A2P25067 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC14.8□□□□□ -0.04
COL8A2P25067 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
COL8A2P25067 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
COL8A2P25067 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC14.8□□□□□ -0.04
COL8A2P25067 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
COL8A2P25067 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
COL8A2P25067 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
COL8A2P25067 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
COL8A2P25067 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
COL8A2P25067 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC14.8□□□□□ -0.04
COL8A2P25067 INIP-202ENST00000374236 874 ntTSL 2 BASIC14.8□□□□□ -0.04
COL8A2P25067 MIR574-201ENST00000385209 96 ntBASIC14.8□□□□□ -0.04
COL8A2P25067 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC14.8□□□□□ -0.04
COL8A2P25067 SPDYE21P-201ENST00000413323 827 ntBASIC14.8□□□□□ -0.04
COL8A2P25067 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC14.8□□□□□ -0.04
COL8A2P25067 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
COL8A2P25067 PRYP5-201ENST00000451909 266 ntBASIC14.8□□□□□ -0.04
COL8A2P25067 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
COL8A2P25067 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC14.8□□□□□ -0.04
COL8A2P25067 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
COL8A2P25067 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
COL8A2P25067 RPL18-209ENST00000550645 463 ntTSL 5 BASIC14.8□□□□□ -0.04
COL8A2P25067 RPL18-214ENST00000552588 559 ntTSL 3 BASIC14.8□□□□□ -0.04
COL8A2P25067 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC14.8□□□□□ -0.04
COL8A2P25067 AL671883.3-201ENST00000603274 991 ntBASIC14.8□□□□□ -0.04
COL8A2P25067 AC019129.2-201ENST00000609837 1235 ntBASIC14.8□□□□□ -0.04
COL8A2P25067 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
COL8A2P25067 AC107918.4-202ENST00000641623 219 ntBASIC14.8□□□□□ -0.04
COL8A2P25067 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
COL8A2P25067 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
COL8A2P25067 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
COL8A2P25067 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
COL8A2P25067 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
COL8A2P25067 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
COL8A2P25067 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
COL8A2P25067 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC14.8□□□□□ -0.04
COL8A2P25067 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC14.8□□□□□ -0.04
COL8A2P25067 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
COL8A2P25067 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
COL8A2P25067 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
COL8A2P25067 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC14.8□□□□□ -0.04
COL8A2P25067 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
COL8A2P25067 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
COL8A2P25067 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
COL8A2P25067 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
COL8A2P25067 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
COL8A2P25067 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
COL8A2P25067 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
COL8A2P25067 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
COL8A2P25067 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
COL8A2P25067 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
COL8A2P25067 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
COL8A2P25067 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
COL8A2P25067 CSF3-203ENST00000394148 622 ntTSL 3 BASIC14.79□□□□□ -0.04
COL8A2P25067 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC14.79□□□□□ -0.04
COL8A2P25067 CENPM-204ENST00000402420 688 ntTSL 5 BASIC14.79□□□□□ -0.04
COL8A2P25067 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
COL8A2P25067 AL020989.1-201ENST00000422979 469 ntBASIC14.79□□□□□ -0.04
COL8A2P25067 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC14.79□□□□□ -0.04
COL8A2P25067 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC14.79□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms