Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC17.7■□□□□ 0.42
XPAP23025 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
XPAP23025 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
XPAP23025 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
XPAP23025 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC17.7■□□□□ 0.42
XPAP23025 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
XPAP23025 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
XPAP23025 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
XPAP23025 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
XPAP23025 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
XPAP23025 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
XPAP23025 NEFHP1-201ENST00000412845 2629 ntBASIC17.69■□□□□ 0.42
XPAP23025 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
XPAP23025 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
XPAP23025 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
XPAP23025 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC17.69■□□□□ 0.42
XPAP23025 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC17.69■□□□□ 0.42
XPAP23025 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
XPAP23025 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC17.69■□□□□ 0.42
XPAP23025 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC17.69■□□□□ 0.42
XPAP23025 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
XPAP23025 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC17.69■□□□□ 0.42
XPAP23025 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC17.69■□□□□ 0.42
XPAP23025 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC17.69■□□□□ 0.42
XPAP23025 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
XPAP23025 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC17.69■□□□□ 0.42
XPAP23025 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC17.69■□□□□ 0.42
XPAP23025 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
XPAP23025 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
XPAP23025 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
XPAP23025 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC17.69■□□□□ 0.42
XPAP23025 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC17.69■□□□□ 0.42
XPAP23025 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
XPAP23025 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
XPAP23025 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC17.69■□□□□ 0.42
XPAP23025 AC009078.2-202ENST00000463353 338 ntBASIC17.69■□□□□ 0.42
XPAP23025 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC17.69■□□□□ 0.42
XPAP23025 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC17.69■□□□□ 0.42
XPAP23025 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
XPAP23025 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
XPAP23025 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC17.69■□□□□ 0.42
XPAP23025 AL139288.1-201ENST00000623748 933 ntBASIC17.69■□□□□ 0.42
XPAP23025 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC17.69■□□□□ 0.42
XPAP23025 VPS51-217ENST00000639871 243 ntTSL 5 BASIC17.69■□□□□ 0.42
XPAP23025 AP000867.4-201ENST00000641616 219 ntBASIC17.69■□□□□ 0.42
XPAP23025 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
XPAP23025 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC17.69■□□□□ 0.42
XPAP23025 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
XPAP23025 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
XPAP23025 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
XPAP23025 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
XPAP23025 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
XPAP23025 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC17.69■□□□□ 0.42
XPAP23025 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
XPAP23025 CD276-201ENST00000318424 2738 ntTSL 5 BASIC17.69■□□□□ 0.42
XPAP23025 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
XPAP23025 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
XPAP23025 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC17.69■□□□□ 0.42
XPAP23025 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
XPAP23025 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
XPAP23025 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
XPAP23025 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC17.68■□□□□ 0.42
XPAP23025 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
XPAP23025 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC17.68■□□□□ 0.42
XPAP23025 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
XPAP23025 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC17.68■□□□□ 0.42
XPAP23025 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
XPAP23025 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC17.68■□□□□ 0.42
XPAP23025 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC17.68■□□□□ 0.42
XPAP23025 AC079776.4-201ENST00000511039 504 ntBASIC17.68■□□□□ 0.42
XPAP23025 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
XPAP23025 MSRA-206ENST00000521209 814 ntTSL 3 BASIC17.68■□□□□ 0.42
XPAP23025 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC17.68■□□□□ 0.42
XPAP23025 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
XPAP23025 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC17.68■□□□□ 0.42
XPAP23025 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
XPAP23025 TP73-AS1-207ENST00000624167 988 ntBASIC17.68■□□□□ 0.42
XPAP23025 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC17.68■□□□□ 0.42
XPAP23025 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC17.68■□□□□ 0.42
XPAP23025 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC17.68■□□□□ 0.42
XPAP23025 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
XPAP23025 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
XPAP23025 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC17.68■□□□□ 0.42
XPAP23025 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC17.68■□□□□ 0.42
XPAP23025 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
XPAP23025 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
XPAP23025 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
XPAP23025 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC17.67■□□□□ 0.42
XPAP23025 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
XPAP23025 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
XPAP23025 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC17.67■□□□□ 0.42
XPAP23025 PODN-203ENST00000395871 2744 ntTSL 5 BASIC17.67■□□□□ 0.42
XPAP23025 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
XPAP23025 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
XPAP23025 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
XPAP23025 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
XPAP23025 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
XPAP23025 MED22-202ENST00000371999 987 ntTSL 3 BASIC17.67■□□□□ 0.42
XPAP23025 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
XPAP23025 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms