Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC16.9■□□□□ 0.3
CAPN3P20807 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
CAPN3P20807 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
CAPN3P20807 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC16.9■□□□□ 0.3
CAPN3P20807 DAP-202ENST00000432074 1048 ntTSL 2 BASIC16.9■□□□□ 0.3
CAPN3P20807 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC16.9■□□□□ 0.3
CAPN3P20807 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC16.9■□□□□ 0.3
CAPN3P20807 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CAPN3P20807 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CAPN3P20807 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CAPN3P20807 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CAPN3P20807 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
CAPN3P20807 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC16.9■□□□□ 0.3
CAPN3P20807 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CAPN3P20807 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CAPN3P20807 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CAPN3P20807 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
CAPN3P20807 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CAPN3P20807 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.3
CAPN3P20807 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CAPN3P20807 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CAPN3P20807 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
CAPN3P20807 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CAPN3P20807 PCDHA14-201ENST00000506751 2298 ntBASIC16.89■□□□□ 0.29
CAPN3P20807 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC16.89■□□□□ 0.29
CAPN3P20807 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
CAPN3P20807 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC16.89■□□□□ 0.29
CAPN3P20807 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CAPN3P20807 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CAPN3P20807 HES2-202ENST00000377836 507 ntTSL 2 BASIC16.89■□□□□ 0.29
CAPN3P20807 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CAPN3P20807 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
CAPN3P20807 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CAPN3P20807 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC16.89■□□□□ 0.29
CAPN3P20807 NEK4P2-201ENST00000580004 1012 ntBASIC16.89■□□□□ 0.29
CAPN3P20807 CLEC4GP1-201ENST00000596555 870 ntBASIC16.89■□□□□ 0.29
CAPN3P20807 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC16.89■□□□□ 0.29
CAPN3P20807 AC069148.1-201ENST00000608741 768 ntBASIC16.89■□□□□ 0.29
CAPN3P20807 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC16.89■□□□□ 0.29
CAPN3P20807 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CAPN3P20807 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CAPN3P20807 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CAPN3P20807 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CAPN3P20807 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CAPN3P20807 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CAPN3P20807 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
CAPN3P20807 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC16.89■□□□□ 0.29
CAPN3P20807 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
CAPN3P20807 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CAPN3P20807 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CAPN3P20807 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
CAPN3P20807 AC016396.2-201ENST00000562575 1417 ntBASIC16.88■□□□□ 0.29
CAPN3P20807 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CAPN3P20807 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC16.88■□□□□ 0.29
CAPN3P20807 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CAPN3P20807 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
CAPN3P20807 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CAPN3P20807 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CAPN3P20807 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CAPN3P20807 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC16.88■□□□□ 0.29
CAPN3P20807 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CAPN3P20807 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CAPN3P20807 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CAPN3P20807 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CAPN3P20807 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CAPN3P20807 ANKRD20A18P-201ENST00000359341 492 ntBASIC16.88■□□□□ 0.29
CAPN3P20807 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC16.88■□□□□ 0.29
CAPN3P20807 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
CAPN3P20807 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC16.88■□□□□ 0.29
CAPN3P20807 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC16.88■□□□□ 0.29
CAPN3P20807 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC16.88■□□□□ 0.29
CAPN3P20807 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC16.88■□□□□ 0.29
CAPN3P20807 AC141257.4-201ENST00000634557 245 ntBASIC16.88■□□□□ 0.29
CAPN3P20807 AC136944.6-201ENST00000634818 245 ntBASIC16.88■□□□□ 0.29
CAPN3P20807 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC16.88■□□□□ 0.29
CAPN3P20807 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC16.88■□□□□ 0.29
CAPN3P20807 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CAPN3P20807 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
CAPN3P20807 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
CAPN3P20807 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CAPN3P20807 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CAPN3P20807 RHBDF1P1-201ENST00000427504 1941 ntBASIC16.88■□□□□ 0.29
CAPN3P20807 FLJ38576-201ENST00000623820 2459 ntBASIC16.88■□□□□ 0.29
CAPN3P20807 AC116353.5-201ENST00000638148 1699 ntBASIC16.88■□□□□ 0.29
CAPN3P20807 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
CAPN3P20807 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CAPN3P20807 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CAPN3P20807 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC16.87■□□□□ 0.29
CAPN3P20807 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CAPN3P20807 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
CAPN3P20807 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CAPN3P20807 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CAPN3P20807 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CAPN3P20807 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC16.87■□□□□ 0.29
CAPN3P20807 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CAPN3P20807 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CAPN3P20807 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC16.87■□□□□ 0.29
CAPN3P20807 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CAPN3P20807 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CAPN3P20807 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms