Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC16.31■□□□□ 0.2
TNFRSF1BP20333 AC145285.6-201ENST00000604632 637 ntBASIC16.31■□□□□ 0.2
TNFRSF1BP20333 FLJ38576-201ENST00000623820 2459 ntBASIC16.31■□□□□ 0.2
TNFRSF1BP20333 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TNFRSF1BP20333 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TNFRSF1BP20333 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TNFRSF1BP20333 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TNFRSF1BP20333 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC16.31■□□□□ 0.2
TNFRSF1BP20333 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TNFRSF1BP20333 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TNFRSF1BP20333 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TNFRSF1BP20333 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TNFRSF1BP20333 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC16.31■□□□□ 0.2
TNFRSF1BP20333 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC16.31■□□□□ 0.2
TNFRSF1BP20333 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
TNFRSF1BP20333 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TNFRSF1BP20333 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TNFRSF1BP20333 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TNFRSF1BP20333 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TNFRSF1BP20333 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC16.3■□□□□ 0.2
TNFRSF1BP20333 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
TNFRSF1BP20333 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TNFRSF1BP20333 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TNFRSF1BP20333 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
TNFRSF1BP20333 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TNFRSF1BP20333 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC16.3■□□□□ 0.2
TNFRSF1BP20333 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC16.3■□□□□ 0.2
TNFRSF1BP20333 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
TNFRSF1BP20333 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
TNFRSF1BP20333 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC16.3■□□□□ 0.2
TNFRSF1BP20333 ANKRD20A18P-201ENST00000359341 492 ntBASIC16.3■□□□□ 0.2
TNFRSF1BP20333 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TNFRSF1BP20333 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TNFRSF1BP20333 HLA-F-220ENST00000434407 884 ntBASIC16.3■□□□□ 0.2
TNFRSF1BP20333 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TNFRSF1BP20333 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC16.3■□□□□ 0.2
TNFRSF1BP20333 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC16.3■□□□□ 0.2
TNFRSF1BP20333 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC16.3■□□□□ 0.2
TNFRSF1BP20333 LITAF-220ENST00000620789 692 ntTSL 5 BASIC16.3■□□□□ 0.2
TNFRSF1BP20333 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
TNFRSF1BP20333 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TNFRSF1BP20333 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TNFRSF1BP20333 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TNFRSF1BP20333 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TNFRSF1BP20333 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
TNFRSF1BP20333 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TNFRSF1BP20333 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC16.3■□□□□ 0.2
TNFRSF1BP20333 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TNFRSF1BP20333 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TNFRSF1BP20333 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TNFRSF1BP20333 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TNFRSF1BP20333 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
TNFRSF1BP20333 RHBDF1P1-201ENST00000427504 1941 ntBASIC16.29■□□□□ 0.2
TNFRSF1BP20333 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TNFRSF1BP20333 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TNFRSF1BP20333 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC16.29■□□□□ 0.2
TNFRSF1BP20333 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TNFRSF1BP20333 AC046185.3-201ENST00000623228 1824 ntBASIC16.29■□□□□ 0.2
TNFRSF1BP20333 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TNFRSF1BP20333 AC008894.3-201ENST00000624324 3103 ntBASIC16.29■□□□□ 0.2
TNFRSF1BP20333 AC105020.1-201ENST00000435356 2205 ntBASIC16.29■□□□□ 0.2
TNFRSF1BP20333 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TNFRSF1BP20333 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TNFRSF1BP20333 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC16.29■□□□□ 0.2
TNFRSF1BP20333 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
TNFRSF1BP20333 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TNFRSF1BP20333 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TNFRSF1BP20333 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC16.29■□□□□ 0.2
TNFRSF1BP20333 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TNFRSF1BP20333 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TNFRSF1BP20333 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TNFRSF1BP20333 AC005104.2-201ENST00000427818 678 ntBASIC16.29■□□□□ 0.2
TNFRSF1BP20333 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC16.29■□□□□ 0.2
TNFRSF1BP20333 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC16.29■□□□□ 0.2
TNFRSF1BP20333 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TNFRSF1BP20333 AC011558.1-201ENST00000623459 338 ntBASIC16.29■□□□□ 0.2
TNFRSF1BP20333 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TNFRSF1BP20333 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TNFRSF1BP20333 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TNFRSF1BP20333 ADM-208ENST00000534464 1640 ntTSL 2 BASIC16.29■□□□□ 0.2
TNFRSF1BP20333 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
TNFRSF1BP20333 PCDHB19P-201ENST00000570871 2371 ntBASIC16.29■□□□□ 0.2
TNFRSF1BP20333 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TNFRSF1BP20333 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TNFRSF1BP20333 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TNFRSF1BP20333 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
TNFRSF1BP20333 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TNFRSF1BP20333 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC16.29■□□□□ 0.2
TNFRSF1BP20333 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC16.29■□□□□ 0.2
TNFRSF1BP20333 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TNFRSF1BP20333 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TNFRSF1BP20333 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TNFRSF1BP20333 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC16.29■□□□□ 0.2
TNFRSF1BP20333 LINC01311-201ENST00000565162 1445 ntBASIC16.28■□□□□ 0.2
TNFRSF1BP20333 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC16.28■□□□□ 0.2
TNFRSF1BP20333 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC16.28■□□□□ 0.2
TNFRSF1BP20333 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TNFRSF1BP20333 AC116353.5-201ENST00000638148 1699 ntBASIC16.28■□□□□ 0.2
TNFRSF1BP20333 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC16.28■□□□□ 0.2
TNFRSF1BP20333 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms