Protein–RNA interactions for Protein: P19338

NCL, Nucleolin, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP19338 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC20.89■□□□□ 0.93
NCLP19338 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
NCLP19338 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
NCLP19338 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
NCLP19338 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
NCLP19338 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
NCLP19338 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
NCLP19338 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
NCLP19338 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
NCLP19338 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
NCLP19338 BOC-212ENST00000485230 2173 ntTSL 2 BASIC20.89■□□□□ 0.93
NCLP19338 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
NCLP19338 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
NCLP19338 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
NCLP19338 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
NCLP19338 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC20.89■□□□□ 0.93
NCLP19338 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
NCLP19338 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
NCLP19338 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
NCLP19338 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
NCLP19338 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
NCLP19338 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
NCLP19338 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NCLP19338 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC20.88■□□□□ 0.93
NCLP19338 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
NCLP19338 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC20.88■□□□□ 0.93
NCLP19338 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC20.88■□□□□ 0.93
NCLP19338 TSPY17P-201ENST00000450329 467 ntBASIC20.88■□□□□ 0.93
NCLP19338 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NCLP19338 DUX4L26-201ENST00000489078 1255 ntBASIC20.88■□□□□ 0.93
NCLP19338 AC009065.1-201ENST00000564055 1225 ntBASIC20.88■□□□□ 0.93
NCLP19338 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC20.88■□□□□ 0.93
NCLP19338 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC20.88■□□□□ 0.93
NCLP19338 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
NCLP19338 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC20.88■□□□□ 0.93
NCLP19338 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NCLP19338 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
NCLP19338 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
NCLP19338 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NCLP19338 ASL-204ENST00000395331 1538 ntTSL 5 BASIC20.88■□□□□ 0.93
NCLP19338 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NCLP19338 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC20.88■□□□□ 0.93
NCLP19338 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC20.88■□□□□ 0.93
NCLP19338 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
NCLP19338 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
NCLP19338 CES3-203ENST00000543856 3178 ntTSL 2 BASIC20.87■□□□□ 0.93
NCLP19338 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC20.87■□□□□ 0.93
NCLP19338 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC20.87■□□□□ 0.93
NCLP19338 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC20.87■□□□□ 0.93
NCLP19338 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NCLP19338 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NCLP19338 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC20.87■□□□□ 0.93
NCLP19338 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC20.87■□□□□ 0.93
NCLP19338 AC100803.2-201ENST00000562459 1963 ntBASIC20.87■□□□□ 0.93
NCLP19338 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC20.87■□□□□ 0.93
NCLP19338 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC20.87■□□□□ 0.93
NCLP19338 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
NCLP19338 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC20.87■□□□□ 0.93
NCLP19338 NME3-204ENST00000563498 920 ntTSL 2 BASIC20.87■□□□□ 0.93
NCLP19338 AL353719.1-201ENST00000566847 864 ntBASIC20.87■□□□□ 0.93
NCLP19338 AC006011.2-201ENST00000621313 1158 ntBASIC20.87■□□□□ 0.93
NCLP19338 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
NCLP19338 AC112497.1-201ENST00000624824 639 ntBASIC20.87■□□□□ 0.93
NCLP19338 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
NCLP19338 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC20.87■□□□□ 0.93
NCLP19338 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
NCLP19338 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC20.87■□□□□ 0.93
NCLP19338 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
NCLP19338 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
NCLP19338 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
NCLP19338 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC20.87■□□□□ 0.93
NCLP19338 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
NCLP19338 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NCLP19338 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NCLP19338 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC20.86■□□□□ 0.93
NCLP19338 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
NCLP19338 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
NCLP19338 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NCLP19338 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
NCLP19338 FLJ16779-201ENST00000612722 7638 ntBASIC20.86■□□□□ 0.93
NCLP19338 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NCLP19338 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NCLP19338 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
NCLP19338 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NCLP19338 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
NCLP19338 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NCLP19338 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
NCLP19338 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC20.86■□□□□ 0.93
NCLP19338 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC20.86■□□□□ 0.93
NCLP19338 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
NCLP19338 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NCLP19338 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC20.86■□□□□ 0.93
NCLP19338 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
NCLP19338 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NCLP19338 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
NCLP19338 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
NCLP19338 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NCLP19338 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NCLP19338 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
NCLP19338 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 218.6 ms