Protein–RNA interactions for Protein: P17600

SYN1, Synapsin-1, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYN1P17600 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
SYN1P17600 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC18.92■□□□□ 0.62
SYN1P17600 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.92■□□□□ 0.62
SYN1P17600 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SYN1P17600 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SYN1P17600 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC18.92■□□□□ 0.62
SYN1P17600 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC18.92■□□□□ 0.62
SYN1P17600 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SYN1P17600 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SYN1P17600 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SYN1P17600 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC18.92■□□□□ 0.62
SYN1P17600 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC18.92■□□□□ 0.62
SYN1P17600 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC18.92■□□□□ 0.62
SYN1P17600 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC18.92■□□□□ 0.62
SYN1P17600 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
SYN1P17600 AC009118.2-201ENST00000613275 655 ntBASIC18.92■□□□□ 0.62
SYN1P17600 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC18.92■□□□□ 0.62
SYN1P17600 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
SYN1P17600 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SYN1P17600 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SYN1P17600 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
SYN1P17600 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SYN1P17600 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SYN1P17600 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC18.91■□□□□ 0.62
SYN1P17600 CU639417.3-201ENST00000624240 1404 ntBASIC18.91■□□□□ 0.62
SYN1P17600 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC18.91■□□□□ 0.62
SYN1P17600 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SYN1P17600 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC18.91■□□□□ 0.62
SYN1P17600 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SYN1P17600 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SYN1P17600 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
SYN1P17600 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SYN1P17600 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SYN1P17600 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
SYN1P17600 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SYN1P17600 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
SYN1P17600 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SYN1P17600 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SYN1P17600 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
SYN1P17600 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC18.91■□□□□ 0.62
SYN1P17600 AC241585.1-201ENST00000433527 519 ntBASIC18.91■□□□□ 0.62
SYN1P17600 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC18.91■□□□□ 0.62
SYN1P17600 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC18.91■□□□□ 0.62
SYN1P17600 SLC25A6P2-201ENST00000497974 877 ntBASIC18.91■□□□□ 0.62
SYN1P17600 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC18.91■□□□□ 0.62
SYN1P17600 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC18.91■□□□□ 0.62
SYN1P17600 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC18.91■□□□□ 0.62
SYN1P17600 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SYN1P17600 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC18.91■□□□□ 0.62
SYN1P17600 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SYN1P17600 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SYN1P17600 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SYN1P17600 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
SYN1P17600 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC18.91■□□□□ 0.62
SYN1P17600 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
SYN1P17600 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SYN1P17600 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SYN1P17600 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC18.9■□□□□ 0.62
SYN1P17600 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SYN1P17600 AC093010.1-201ENST00000473625 1624 ntBASIC18.9■□□□□ 0.62
SYN1P17600 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SYN1P17600 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC18.9■□□□□ 0.62
SYN1P17600 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
SYN1P17600 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
SYN1P17600 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SYN1P17600 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SYN1P17600 PTPA-220ENST00000436883 532 ntTSL 4 BASIC18.9■□□□□ 0.62
SYN1P17600 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
SYN1P17600 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC18.9■□□□□ 0.62
SYN1P17600 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC18.9■□□□□ 0.62
SYN1P17600 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC18.9■□□□□ 0.62
SYN1P17600 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC18.9■□□□□ 0.62
SYN1P17600 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC18.9■□□□□ 0.62
SYN1P17600 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SYN1P17600 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
SYN1P17600 AC010336.2-201ENST00000564226 506 ntBASIC18.9■□□□□ 0.62
SYN1P17600 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC18.9■□□□□ 0.62
SYN1P17600 CD7-202ENST00000578509 925 ntTSL 3 BASIC18.9■□□□□ 0.62
SYN1P17600 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC18.9■□□□□ 0.62
SYN1P17600 AC084346.2-201ENST00000607097 949 ntBASIC18.9■□□□□ 0.62
SYN1P17600 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SYN1P17600 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SYN1P17600 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
SYN1P17600 AKAP8P1-201ENST00000434743 1349 ntBASIC18.9■□□□□ 0.62
SYN1P17600 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC18.9■□□□□ 0.62
SYN1P17600 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SYN1P17600 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
SYN1P17600 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
SYN1P17600 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
SYN1P17600 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SYN1P17600 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC18.9■□□□□ 0.62
SYN1P17600 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
SYN1P17600 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SYN1P17600 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SYN1P17600 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SYN1P17600 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
SYN1P17600 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
SYN1P17600 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SYN1P17600 AC116562.4-201ENST00000641316 2276 ntBASIC18.89■□□□□ 0.61
SYN1P17600 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms