Protein–RNA interactions for Protein: P13611

VCAN, Versican core protein, humanhuman

Predictions only

Length 3,396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCANP13611 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
VCANP13611 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
VCANP13611 CD81-202ENST00000381036 880 ntTSL 3 BASIC17.94■□□□□ 0.46
VCANP13611 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC17.94■□□□□ 0.46
VCANP13611 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
VCANP13611 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC17.94■□□□□ 0.46
VCANP13611 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC17.94■□□□□ 0.46
VCANP13611 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
VCANP13611 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
VCANP13611 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
VCANP13611 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
VCANP13611 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC17.94■□□□□ 0.46
VCANP13611 PTCHD3P3-201ENST00000403073 906 ntBASIC17.94■□□□□ 0.46
VCANP13611 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
VCANP13611 MIR6775-201ENST00000617557 69 ntBASIC17.94■□□□□ 0.46
VCANP13611 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC17.94■□□□□ 0.46
VCANP13611 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
VCANP13611 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
VCANP13611 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
VCANP13611 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC17.94■□□□□ 0.46
VCANP13611 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
VCANP13611 AC098614.1-201ENST00000368528 745 ntBASIC17.94■□□□□ 0.46
VCANP13611 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC17.94■□□□□ 0.46
VCANP13611 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
VCANP13611 ORC6-206ENST00000568364 888 ntTSL 5 BASIC17.94■□□□□ 0.46
VCANP13611 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC17.94■□□□□ 0.46
VCANP13611 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
VCANP13611 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
VCANP13611 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC17.94■□□□□ 0.46
VCANP13611 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC17.94■□□□□ 0.46
VCANP13611 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
VCANP13611 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
VCANP13611 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC17.93■□□□□ 0.46
VCANP13611 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC17.93■□□□□ 0.46
VCANP13611 AL355994.2-201ENST00000447882 704 ntBASIC17.93■□□□□ 0.46
VCANP13611 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC17.93■□□□□ 0.46
VCANP13611 ZNF767P-206ENST00000513792 565 ntBASIC17.93■□□□□ 0.46
VCANP13611 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC17.93■□□□□ 0.46
VCANP13611 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC17.93■□□□□ 0.46
VCANP13611 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
VCANP13611 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
VCANP13611 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
VCANP13611 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
VCANP13611 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC17.93■□□□□ 0.46
VCANP13611 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
VCANP13611 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
VCANP13611 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
VCANP13611 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
VCANP13611 KLF4P1-201ENST00000412782 1185 ntBASIC17.93■□□□□ 0.46
VCANP13611 AP006294.1-201ENST00000415407 339 ntBASIC17.93■□□□□ 0.46
VCANP13611 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC17.93■□□□□ 0.46
VCANP13611 PRR29-204ENST00000577953 565 ntTSL 4 BASIC17.93■□□□□ 0.46
VCANP13611 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
VCANP13611 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
VCANP13611 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
VCANP13611 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
VCANP13611 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
VCANP13611 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC17.93■□□□□ 0.46
VCANP13611 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC17.93■□□□□ 0.46
VCANP13611 AL671277.1-201ENST00000429656 993 ntBASIC17.93■□□□□ 0.46
VCANP13611 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC17.93■□□□□ 0.46
VCANP13611 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC17.93■□□□□ 0.46
VCANP13611 MIR4453-201ENST00000584019 89 ntBASIC17.93■□□□□ 0.46
VCANP13611 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
VCANP13611 SNAI3-AS1-205ENST00000568633 2096 ntBASIC17.93■□□□□ 0.46
VCANP13611 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC17.92■□□□□ 0.46
VCANP13611 AL512343.1-201ENST00000605837 169 ntBASIC17.92■□□□□ 0.46
VCANP13611 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
VCANP13611 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC17.92■□□□□ 0.46
VCANP13611 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
VCANP13611 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC17.92■□□□□ 0.46
VCANP13611 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
VCANP13611 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
VCANP13611 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
VCANP13611 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC17.92■□□□□ 0.46
VCANP13611 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
VCANP13611 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC17.92■□□□□ 0.46
VCANP13611 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
VCANP13611 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
VCANP13611 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC17.92■□□□□ 0.46
VCANP13611 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC17.92■□□□□ 0.46
VCANP13611 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
VCANP13611 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC17.91■□□□□ 0.46
VCANP13611 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC17.91■□□□□ 0.46
VCANP13611 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
VCANP13611 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
VCANP13611 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
VCANP13611 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
VCANP13611 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC17.91■□□□□ 0.46
VCANP13611 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
VCANP13611 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC17.91■□□□□ 0.46
VCANP13611 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC17.91■□□□□ 0.46
VCANP13611 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
VCANP13611 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC17.91■□□□□ 0.46
VCANP13611 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC17.91■□□□□ 0.46
VCANP13611 HARS-203ENST00000431330 1774 ntTSL 2 BASIC17.91■□□□□ 0.46
VCANP13611 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC17.91■□□□□ 0.46
VCANP13611 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
VCANP13611 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC17.91■□□□□ 0.46
VCANP13611 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms